Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01724 CCTCCATATCCATCACCTTTATTTTGCTTACAATTAGTATATAATTTTCTTGGAGAATCATCGCTTCAGCACCTTCATGATCGTTTCCTATATTTTTTGTTCTTATCTTCACTAACATCAATTTGTTCTATACATATACACCTCTAATTCAGCCTTGGAGCAACCTAGTTGAAGATGCCATGGGGAACTACTTTGGCAAAACTAGAAAGCGTGGCACTCCAAGGCCCACTAACGATAAAAGAAGTGGTGGAAGAATCTATACTACCGTGACCCCTAGAGGTTTACCACCCAATTTTCCACCACTGTTGTATCCAACTCTTGAACCTCCACCACTACAGTTACCGTCGCCGCCACAATCATCTTCGTCGCCGCCACAATTTACTTTCAAGAAAACTAGTTTTGGGAGATCCGATAGCTCTAAACAAAGCTCTTCAGACATGAACAAGAAGTATGGCTTGATTCGTGATAACTTCTCTACCCTTGAACAGGTGACAACAGCCTTGAGGAAAGAAGGATTAGAATCATCAAATCTCATTCTTGGAATTGATTTTACAAAGAGCAATGAGTGGACTGGCAGAATCTCATTCAATAAAAGAAGCCTGCATGCTATTGGAAGCACACCTAACCCTTATGAGAAGGCCATTACCATTATTGGCAAGACTTTGGCTCCCTTTGATGATGATAACTTGATTCCATGCTTTGGCTTTGGTGATTCTACTACCCATGATCAAGAAGTGTTTAGCTTTCACAGTGATCATTCACCTTGTCAGGGCTTTGAGGAAGTCTTGGCTTGTTATCAGAAAATAGTTCCGAACTTGAAACTTTCAGGGCCAACTTCTTATGCTCCGGTGATTGAGGCTGCTATAGACATAGTTGAGAAAAACCGTGGCCAATTCCATGTGTTGGTAATTGTTGCTGATGGCCAGGTTACAAGAAGTGTGGACACTGGAGATGGAGAACTCAGCCCTCAAGAACAGAAGACGATTAAAGCAATCGTTGATGCAAGTGCATATCCCCTTGCGATAGTTCTGGTTGGAGTTGGTGATGGACCCTGGGAAGACATGAGAAAGTTTGATGATAGGATACCTGCACGTGATTATGACAATTTTCAGTTTGTTAATTTCACAGAAATAATGTCCAGAAACACAAGCCCCTCCGAGAAAGAAGCAGCTTTTGCTCTGGCTGCTCTCATGGAGATCCCTTTCCAATATAAAGCAACCATGGAATTTGGAATACTAGGGCGTGTAACAGGAAGAGCAAAGAGAATAGTTCCAAAACCTCCTCCTATTCCTTATTCTAGACCCGTTCCACCACCAGCACGTGTACCCAGCAATACAACAGCATCCAATGCAGATGATCAAAACCAAGCTGTTTGTCCTGTTTGTTTGACCAATGCAAAAGACTTGGCCTTTGGATGTGGACACATGACTTGCAGAGAATGTGGACACAAGTTAACCAATTGTCCAATGTGCCGAGAGAAAATCACTACTCGTCTTAGGGTGTATAGTGGGTGATTGTAATCAATCAAAATCGTGCACATTAATTACATAGCTAGTTTGCTTAAGATAAATTTCTCAATAGGGTAGAAAGTGTGATCAAGAGTCCAAAAATGAACATGGATTCATTGTGAAAAAAGATAACTTGTCTCTGTTGGGATATTTCAAGAGTGGAGATGAATTGCATGTGCAAGTTTCTATACATGTGGTTCATGTGGATGTGTTTGAAGTTGTATATTAATTAGTACTATAAAGCTGCACATAATGTCA 1766 0.4094 MGNYFGKTRKRGTPRPTNDKRSGGRIYTTVTPRGLPPNFPPLLYPTLEPPPLQLPSPPQSSSSPPQFTFKKTSFGRSDSSKQSSSDMNKKYGLIRDNFSTLEQVTTALRKEGLESSNLILGIDFTKSNEWTGRISFNKRSLHAIGSTPNPYEKAITIIGKTLAPFDDDNLIPCFGFGDSTTHDQEVFSFHSDHSPCQGFEEVLACYQKIVPNLKLSGPTSYAPVIEAAIDIVEKNRGQFHVLVIVADGQVTRSVDTGDGELSPQEQKTIKAIVDASAYPLAIVLVGVGDGPWEDMRKFDDRIPARDYDNFQFVNFTEIMSRNTSPSEKEAAFALAALMEIPFQYKATMEFGILGRVTGRAKRIVPKPPPIPYSRPVPPPARVPSNTTASNADDQNQAVCPVCLTNAKDLAFGCGHMTCRECGHKLTNCPMCREKITTRLRVYSG 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01724 444 Pfam Zinc finger, C3HC4 type (RING finger) 397 437 - -
Pste3g01724 444 Pfam Copine 140 352 IPR010734 -
Pste3g01724 444 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 384 443 IPR013083 -
Pste3g01724 444 MobiDBLite consensus disorder prediction 63 88 - -
Pste3g01724 444 ProSiteProfiles Zinc finger RING-type profile. 399 432 IPR001841 -
Pste3g01724 444 SUPERFAMILY vWA-like 116 299 IPR036465 -
Pste3g01724 444 PANTHER COPINE FAMILY PROTEIN 1 76 420 - -
Pste3g01724 444 MobiDBLite consensus disorder prediction 1 88 - -
Pste3g01724 444 MobiDBLite consensus disorder prediction 364 390 - -
Pste3g01724 444 MobiDBLite consensus disorder prediction 34 62 - -
Pste3g01724 444 MobiDBLite consensus disorder prediction 364 382 - -
Pste3g01724 444 SUPERFAMILY RING/U-box 392 438 - -
Pste3g01724 444 SMART VWA_4 115 317 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01724 Pste-Chr3 11014704 11027478 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01724 3 11014704 11027478 Pste3g01724 3 11014704 11027478 ECH
Pste3g01724 3 11014704 11027478 Pste1g00215 1 760094 776283 PCT