Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01458 AGCCAAAGTTAGATGCCAAGACTGAGATTTTGATTATTTCTAATTCAAGGAGTTTAGTGGTCAACGGCAAGAGAATGAAAAATCATGGTTACAATGGACCCTCTTGTGTCATCATGGTGCAAGACAAAATAATAATCTCTGCTTTCTACCCTCACAACAGTTTCTTTTTTCATCCTCTTCTCATCTGTGTTCGTGTGTATGTGCTTTTTTTAGTTCAGAGCCAGATTCAAGGAGCTGAAAGACGTGAAACCTTGGATTTGAATCAGCCAATTTTTTTAGTTACACGTAATTGCAAAGATAAGATGAGTGTTATGAACGGTCCTGTTCTTAAGTATTCAGATGTGGAGAATCAGCTAAGGAAAAACCAAGAAATGGATTCAAGTATTGGAAATCCACAACAACACTGTCACCAACCAAATTCTGGATTATTCAGGTACTGTTCTGCTCCAAGCTCATTGCTGGCAAGCCTTATTGACAACACCATCGATGACTGTGTCACTGAGGAATCATTCACAAGTGAGAATCATCAGCATTATGTTCCATTCACAAGTTCAGAAATGGAGACAATGTTTTCCAAACTGCTACCATCCAACAATGGATGGAGTAATTCAGAACCTTTGCAAGAGTTTGGAGGCAAGCCTGTGAAGCAGGAAATAGGAGAATCTGTTCCACAAGGACCACCACAACAACAACAGAATGATTACTCTTATGGTGGCCCTAAGTTAATTTACCAATCTCAGCAGATTCAAGGCTTGCCAAATGGTTCCTCCACTGCTGCTGGAAATGCTTTTGATAGCTCTTTTGGTGTGGTGAACTCCTTGGCTTCTGAGAATTCCATTCAATCTAAAATGAGTGTGGGTGCCAGGAACGGTTCCAACCTCTTTAGGCAAAAGAGCTCCCCTGCTGGATTTTTCTCCATTGAAAATGAGCTTGCAGCATTCAGAGAGGTAGGAAATTTTAAAGCCAATGATGTTTCAAATGGACAGGCTACTGCATCAACAAGTGGATTGCATAGTACTCTTACTTTCTCTTCTAGGCCATCCTCAAGCTTGAAAAGGATGCCACAAATAGCTGAAAATGGAAATGAAAGCCTAGAAGAAAATTGTGACCAAAATAGAAACCTAGTAAATGACAATGGAAGCTCAAAATGTTACATTCCTAGCTTCACCAGTGAATTCTGGGACAATTCTGCACTCAATGCTCCCAAAACAGAAAATGAAGATGAAATCATGTTTTCCAGTTCTAATGGTTTGGAATCTCAGGAAGCAGATTTCAGCTATCAAAATCTTGGTTTGACTCACCATTTGAGTCTACCTAGTTCTTCTACTAAGGTGGCATCCATAGAGAAGTTTCTTCAAATGCAAGGTTCTGTTCCTTGTAAAATTAGAGCCAAAAGAGGGTTTGCCACTCACCCAAGAAGCATTGCAGAGAGGGTAAGAAGAACAAGAATTAGTGAAAGAATGAAGAAATTGCAAGACCTTTTCCCAAAATCAGAAAAGCAAACAAGCACAGCAGAAATGTTAGATTTGGCAGTTGAGTACATTAAGGACCTGCAGCAACAAGTTAAGGTACTCTCAGATTGTAAGGCAAAGTGCAAATGTACAAGTAATGATAAGCATTACACTAGAACTTGTGCCTGATTTATTTACATGTAGATAGCAAAAGGATGGAGGATTTTTTAGTGTGCCAAAGTTAGCAATTGTAATTATATTAAATAATGCTGACATTTGCCTAGTGAGAGTTTAGGTCCAGATGAATATTTTTTTCACTTCAGTTTTTCATTTTCTCTCCTTATTTTCCTTTCCTTCATAGTTTAAGAACCATAAAGGACTAGGATGTTTACCAGAAGTCTTGTAGCTCTCATTTATACTTATAAGAAGTTTTGTGGGAATACATAGTTATCTGACACAAACTTCAATACAATGTTTAATACTGAATTTTACATGGAGATTGGTTTTACAACTAGAAATTATGATCTTCAAGTCAGCTGGGTGGTTTTAGTTTTAAGTTTTTGAATTCATAAAATGTTTAAGTATATTTTTCGATCCTAATAAATTTGTAAATTTTGTTTTTGGTTTCTATTAAACTTTTTCTGCG 2097 0.3729 MKNHGYNGPSCVIMVQDKIIISAFYPHNSFFFHPLLICVRVYVLFLVQSQIQGAERRETLDLNQPIFLVTRNCKDKMSVMNGPVLKYSDVENQLRKNQEMDSSIGNPQQHCHQPNSGLFRYCSAPSSLLASLIDNTIDDCVTEESFTSENHQHYVPFTSSEMETMFSKLLPSNNGWSNSEPLQEFGGKPVKQEIGESVPQGPPQQQQNDYSYGGPKLIYQSQQIQGLPNGSSTAAGNAFDSSFGVVNSLASENSIQSKMSVGARNGSNLFRQKSSPAGFFSIENELAAFREVGNFKANDVSNGQATASTSGLHSTLTFSSRPSSSLKRMPQIAENGNESLEENCDQNRNLVNDNGSSKCYIPSFTSEFWDNSALNAPKTENEDEIMFSSSNGLESQEADFSYQNLGLTHHLSLPSSSTKVASIEKFLQMQGSVPCKIRAKRGFATHPRSIAERVRRTRISERMKKLQDLFPKSEKQTSTAEMLDLAVEYIKDLQQQVKVLSDCKAKCKCTSNDKHYTRTCA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01458 521 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 125 508 - -
Pste3g01458 521 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 443 493 IPR011598 GO:0046983
Pste3g01458 521 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 446 508 IPR036638 GO:0046983
Pste3g01458 521 SMART finulus 449 499 IPR011598 GO:0046983
Pste3g01458 521 FunFam Transcription factor bHLH130 family 444 513 - -
Pste3g01458 521 Pfam Helix-loop-helix DNA-binding domain 449 494 IPR011598 GO:0046983
Pste3g01458 521 Gene3D - 445 516 IPR036638 GO:0046983
Pste3g01458 521 MobiDBLite consensus disorder prediction 306 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01458 Pste-Chr3 9067601 9071438 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste3g01458 HLH 1.5e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01458 3 9067601 9071438 Pste1g04264 1 27053623 27058108 ECH
Pste3g01458 3 9067601 9071438 Pste3g01458 3 9067601 9071438 ECH