Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01082 ATGGGGTCTCAGGGTGGTGGCGATAATAATGGAAAACATTCACAATTTCAGCCTTTGGTGCGACAAAACTCAATGTACAGTCTCACGCTTGATGAAGTTCAGAATCAATTAGGTGACTTAGGAAAACCACTAAGTAGTATGAATCTCGATGAACTTCTGAAAAATGTGTGGACTGCTGAGGCAAACCAGTCCACTGGTATGGACATTGAGGGTTCAGCTCAAACTAGTCAAGTTTCACTGCAACATCAGGCTAGTCTGTCATTAACTAGTGCTCTAAGCGGGAAGACTGTTGATGAGGTTTGGAGGGATATACAACAAAGCAAAGATAACAAAGAGAAGAAATCTCAGGAGAGGCAGCCTACATTGGGAGAGATGACATTGGAGGACTTCTTGGTAAAAGCCGGAGTTGTTGGTGAAGCATCTTCTAATAGGAAGAATACTGGTCCTGCAGTTGGTGTTGATTCAAATGTGGCAGCACCACAGTTTTCTCAGCATGGTCCTTGGATACAGTATCCACAACCACATTATCAGCATCCACAACAAGGTTTATTGGGGGTTTATATGCCTGGTCAGACTATAGCACAGCCATTACACATGGGAGCTAGTGCTGCATCAGATGTTTCATATGCAGATGGTCAAGTGGCATTGTCTTCACCTGTTATAGGAACCTTGTCGGATACTAGGAGACCTGGGAGAAAAAGGGGCACATCAGAGGACATGGTAGAGAAAACTGTTGAGAGGAGGCAGAAGAGAATGATCAAGAATCGGGAATCTGCTGCCCGTTCCAGAGCAAGGAAACAGGCTTACACAACTGAATTGGAGCAGAAAGTCTCGCGTTTGGAAGAGGAAAATGAAAAGCTGAGGAGACAGAAGGAGCTAGAGAAGCTGTTATCAAGTGCTCCTCCACCTCCTGAACCTAAATACCAGATTCGTCGAACATCATCAGCTTCATTCTGACATGTGTAACTGTAACGGAAGGTTTGTAGATATGAGCATCTAAGAGATGCTTTTTAGTTTTGATGTGAGTTGACAATATTACCTTGTCTCTCAAGAATAGTAGCTATTTGATGCATTTGCATCCAATGGTTTATTTTTTTTTCTTCTTGTTAGTAGGCTTGTCTAATTATAACACCTCAG 1137 0.4283 MGSQGGGDNNGKHSQFQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEANQSTGMDIEGSAQTSQVSLQHQASLSLTSALSGKTVDEVWRDIQQSKDNKEKKSQERQPTLGEMTLEDFLVKAGVVGEASSNRKNTGPAVGVDSNVAAPQFSQHGPWIQYPQPHYQHPQQGLLGVYMPGQTIAQPLHMGASAASDVSYADGQVALSSPVIGTLSDTRRPGRKRGTSEDMVEKTVERRQKRMIKNRESAARSRARKQAYTTELEQKVSRLEEENEKLRRQKELEKLLSSAPPPPEPKYQIRRTSSASF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01082 318 Coils Coil 263 297 - -
Pste3g01082 318 MobiDBLite consensus disorder prediction 222 318 - -
Pste3g01082 318 SUPERFAMILY Leucine zipper domain 247 292 IPR046347 GO:0003700|GO:0006355
Pste3g01082 318 CDD bZIP_plant_BZIP46 247 296 - -
Pste3g01082 318 Gene3D - 245 299 - -
Pste3g01082 318 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Pste3g01082 318 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 316 IPR043452 GO:0003700|GO:0045893
Pste3g01082 318 SMART brlzneu 243 312 IPR004827 GO:0003700|GO:0006355
Pste3g01082 318 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 290 IPR004827 GO:0003700|GO:0006355
Pste3g01082 318 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 245 297 - -
Pste3g01082 318 Pfam bZIP transcription factor 247 294 IPR004827 GO:0003700|GO:0006355
Pste3g01082 318 MobiDBLite consensus disorder prediction 227 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01082 Pste-Chr3 6978283 6982132 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01082 17 318 bZIP Transcription Factor Family AT3G56850 55.844 7.79e-96 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste3g01082 bZIP_1 3.5e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01082 3 6978283 6982132 Pste3g01082 3 6978283 6982132 ECH
Pste3g01082 3 6978283 6982132 Pste1g01228 1 3923807 3931602 PCT