Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01080 ACGCGACACGTGCTGGGGTCTGGGAGAGTCGGATTGGGAAACGAAGAGAACAGAGTGGCTTGGGATTTCGGAAACCCTAAGAGCTTCACGCATTTGGGGAACCTCCTTCCTCCACTCGCTCATGCTCCTCGCGTGACCCTAACCCCCCCTGGCTTTCATTCTCTCTTCATCGATCACCATCATCAATCTTTTCTTCTTCTTTCCTTTCAGATAAATGCCGGGGCAGAAAGCTGTTTTATCATGGATATAGATCTCCGGCTACCGTCTGGTGAACATGATAAGGATGATGAAGAAACAACTACAATTGATAACATGTTGGACAGTGAAGAAAAACTGCATAATGGAGGTATAGATGGCAGAAATATAGTTGATGCTAGTATTGAGGTACATGCTTTAAATGGTGGAGATTTGAATTCACCCACAGTTGATATTGTAATGTTTAAGGAAGATACAAATCTTGAGCCACTTTCTGGCATGGAATTCGAGTCTCATGGGGAAGCCTATTCTTTTTACCAAGAATATGCTCGGTCAATGGGATTCAACACTGCAATACAAAATAGTCGTCGCTCAAAAACTTCAAGAGAATTTATAGATGCAAAGTTTGCATGTTCCAGATATGGAACAAAACGAGAGTATGACAAATCATTTAATCGACCACGTGCACGACAGAACAAACAAGATTCTGAAAATTCAACTGGTCGAAGATCTTGCTCTAAGACTGATTGTAAAGCTAGCATGCATGTAAAAAGAAGATCAGATGGAAAATGGGTTATACATAGCTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCCCAAGCAGTTAGTGAACAAACAAGAAGAATGTATGCTGCAATGGCTAGGCAGTTTGCTGAGTACAAAACTGTGGTTGGTCTCAAGAATGAGAAGAATCCATTTGATAAAGGTCGAAATTTGGGCCTGGAGTCAGGGGAGGCTAAACACATGCTTGAGTTTTTCATACAGATGCAAAATATGAATTCTAACTTCTTTTATGCAGTAGATCTTGGTGAAGATCAACGTCTGAAAAATCTTTTATGGATTGATGCTAAAAGTAGGCATGATTATATCAACTTTTGTGATGTAGTGTCATTTGATACCACCTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTGGGAGTGAACCAGCACTACCAATTTACATTACTTGGATGTGCCTTGATATCTGACGAAAGTGCTGCCACTTTTTCTTGGCTATTTCGGACGTGGCTGAAAGGAGTTGGTGGTCAAGTTCCAAAAGTGATCATAACGGATCATGACAAGACATTGAAGTCAGTTATTTCAGATATCTTTCCTAATTCTAGTCATTGTGTTTGTTTATGGCATATATTAGGAAAAGTATCTGAAAATTTAGCTCCTGTAATTAAAAAGAATGAGAATTTTATGGAAAAATTTGAAAAATGCATTTATAGGTCCTTGACCAGTGATGATTTTGACAAGAGATGGTGGGAAATTGTTGATGAGTGTGATCTTCGAGAGGACGAATGCATGCAGTCACTGTATGAAGATCGTAAGTTATGGGCACCAACATACATGAAAGATGTTTTCTTAGGTGGTATGTCTACTGTCCAGCGTTCTGAAAGTGTAAATTCCTTCTTTGACAAATATGTTCACAAGAAGACCTCTGTCCAAGATTTTGTTAGACAGTATGAATCAATCTTGCAAGACAGGTATGAAGAGGAAGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAACCTTAAAAACTCCTTCTCCCCTGGAGAAAAGTGTTGCAGGGGTTTTCACACATGCTGTATTCAAGAAGATCCAAGCTGAGGTTATAGGTGCAGTTGCTTGTCATCCTAAAGCTGACAGGGAGGATGATACAACCATTGTTCACAGGGTTCATGATATGGAAACAAATAAAGACTTTTTTGTTGTGGTGAATCAAGTAAAATCCGAGTTGTCTTGTATATGTCGGTTATTTGAATACAAAGGGTATCTTTGTAGACATGCATTGATTGTTCTTCAATATTCTGGTCAGTCAGTGTTCCCATCTCAATATATTTTAAAACGGTGGACAAAAGATGCAAAGCTCAGGAATATAATGGGAGAAGAACCTGAGCACATGTTGACTAGGGTGCAACGGTACAATGATTTATGTCAGCGAGCACTAAAACTTAGTGAAGAAGGATCATTGTCTCAAGAGAGTTATAGTATTGCATTCCATGCACTGCATGACTCACACAAAAGTTGTGTGAGTGTTAACAATTCTAGTAAGAGTCCTGTGGAAGCTGGTACATCGGGGGCTCATGGTCAGGTTTCCACCGAAGATGATACACAAAGTAGAAATATAGGCAAGCCAAACAAAAAGAAGAATCCAACAAAAAAGAAAAAGGTGAACTCTGAAGCAGAAGTGATGACGGTTGGGGCACTAGACAACTTGCAACAAATGGACAAATTCAGCACTAGAGCTGCAGTAACCCTTGATGGTTATTATGGCACACAGCAGAGCGTGCAAGGGATGTTGAACTTAATGGGACCAACACGTGATGATTACTATGGGAATCAACAGACTCTTCAGGGGCTTGGTCCAATAAGTTCTATACCAACCAGTCACGACGGTTATTATGGTGCACATCAGGGCATGCCTGGCCTGGCACAACTAGATTTTCTGCGAACTGGTTTTGCCTATAGCATTCGGGATGATCCTAACGTGAGAGCAACACAGTTGCATGAGGATCCATCTAGACATGCATGAGACCATCATTTATAACAAGGCTGGTTAAGTGAGAGCTACCAGTTGATTATCTGCGTTGAGAATGGAATACCTCATGCCAATTTGAGTTTATTATGGAAAACCTCCAAAACCAGTATTTGTAATATAATACTGTTATATTAATAAATATAATATAGGATAACTTGATGTTAACATCTATTATAAATATTAATAGGTGTTGTAAGGTTTTAGCGTTCAACCTCATTTAGAGATTGTTGTATTTTATACTTATTCTTTAGGCTACTTGAAAATTTGTAATTATGAAATATTTGTTAGTAATGAAGTAGTCGCATGCTTATTTTCCATTGTTG 3101 0.3902 TRHVLGSGRVGLGNEENRVAWDFGNPKSFTHLGNLLPPLAHAPRVTLTPPGFHSLFIDHHHQSFLLLSFQINAGAESCFIMDIDLRLPSGEHDKDDEETTTIDNMLDSEEKLHNGGIDGRNIVDASIEVHALNGGDLNSPTVDIVMFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKQDSENSTGRRSCSKTDCKASMHVKRRSDGKWVIHSFVKEHNHELLPAQAVSEQTRRMYAAMARQFAEYKTVVGLKNEKNPFDKGRNLGLESGEAKHMLEFFIQMQNMNSNFFYAVDLGEDQRLKNLLWIDAKSRHDYINFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFTLLGCALISDESAATFSWLFRTWLKGVGGQVPKVIITDHDKTLKSVISDIFPNSSHCVCLWHILGKVSENLAPVIKKNENFMEKFEKCIYRSLTSDDFDKRWWEIVDECDLREDECMQSLYEDRKLWAPTYMKDVFLGGMSTVQRSESVNSFFDKYVHKKTSVQDFVRQYESILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGVFTHAVFKKIQAEVIGAVACHPKADREDDTTIVHRVHDMETNKDFFVVVNQVKSELSCICRLFEYKGYLCRHALIVLQYSGQSVFPSQYILKRWTKDAKLRNIMGEEPEHMLTRVQRYNDLCQRALKLSEEGSLSQESYSIAFHALHDSHKSCVSVNNSSKSPVEAGTSGAHGQVSTEDDTQSRNIGKPNKKKNPTKKKKVNSEAEVMTVGALDNLQQMDKFSTRAAVTLDGYYGTQQSVQGMLNLMGPTRDDYYGNQQTLQGLGPISSIPTSHDGYYGAHQGMPGLAQLDFLRTGFAYSIRDDPNVRATQLHEDPSRHA 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01080 923 SMART 26again6 659 686 IPR006564 GO:0008270
Pste3g01080 923 Pfam MULE transposase domain 368 460 IPR018289 -
Pste3g01080 923 Pfam SWIM zinc finger 656 682 IPR007527 GO:0008270
Pste3g01080 923 MobiDBLite consensus disorder prediction 212 244 - -
Pste3g01080 923 ProSiteProfiles Zinc finger SWIM-type profile. 648 684 IPR007527 GO:0008270
Pste3g01080 923 MobiDBLite consensus disorder prediction 757 786 - -
Pste3g01080 923 Pfam FAR1 DNA-binding domain 169 271 IPR004330 -
Pste3g01080 923 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 149 757 IPR031052 GO:0006355
Pste3g01080 923 MobiDBLite consensus disorder prediction 757 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01080 Pste-Chr3 6959781 6967332 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pste3g01080 FAR1 2.6e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01080 3 6959781 6967332 Pste1g01165 1 3716564 3726139 PCT