Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01053 ATGGAAGAAGTGTTAGGGCAAAACTCAGTTCCTCCTCATGGTTCCATTGATAAGTCCAGGATTTTGGATGTTAAACCTCTGAGGAGTTTGATTCCTATTTATTCAATGTCTAATCAAACTCCACCTGCTGACCAGTATCCTTCTGGATTTTCTCCATTTTTCCCATTTGGTGCACCTCAGCAAACTCCAACTGGGGTGTCAACAAAGGGTGCTGCCACACCTGCTCCATTAAGAGCATATAGGAGTCCACTAGGGACAGGAGACAGTGCAACAATGGAGGGGTTCAATGATCAAGATACTTCTGGGAAGAAAAAACGAGGAAGACCGCTGCCACAGCGCCACAGTAGATCAGATAAGCCTAAGAAAATTCAAGAGCCACCTGTTGATTTAAGTGCTGTAGTTGGTTTTACTGCTGCCCAAAGAGAAGATGGTAGCCGTGAAGTGGTTAATCTTGTGCTCATGGCCTTTGATGCGCTTCGTAGAAGGCTGTGCCAGCTTGAAGAGGCCAAGGAATTGAGCTCGGGTTCGATCAAGCGTGCAGATTTGAAAGCTTGCAACACTTTGATGACCAAAGGAGTTCGGACAAACATGACAAAGAGAATAGGATCAGTTCCTGGGATTGAGATTGGGGACATTTTCTTTTTCCGAATGGAATTGTGTGTTGTGGGTTTGCATGCTCCCTCCATGAGTGGAATTGATGCATTGCATATTATGGGTGAGTTTGAGGAGGAAACTCTGGCTGTGAGCATTGTTTCATCAGGAGAATATGATGATGATGCTGAGGATAGTGATGTTATAATTTATACTGGTCAGGGAGGGAACTTCTTCAAGAAAGATAAGCACGCAATTGACCAGAAGCTTAAAAGGGGTAATCTTGCGTTGGATAAGAGTTCGAGACAACACAATGAAATAAGAGTCATCCGAGGCATGAGAGATGGTATCAATCCAAACTCAAAAATATATGTCTATGATGGTCTGTATAAAATCCAAGATTCATGGATAGAAAAAGCAAAAGGCGGTGGTGGTGTATTTAAGTATAAGTTGATAAGAAATCCAGGACAACCTAGTGCCTTTAATGTTTGGAGATCGGTTCAGAAGTGGAAATCTGGATCACATTCAAGGGCTGAACTTATTATTTCAGACCTTTCCAATGGAGCTGAGAGTATTCCTGTATCACTTGTCAATGAGGTTGATAATGTGAAGGCTCCTACTTTTTTCAATTATTTCCATTCTCTTAGACATCCCAAATCCTTCAGTTTAATGCAGCCTTCTCATGGTTGCACCTGTCCTAAAGCATGTGTCCCAGGTGATTTGAACTGTTCTTGCATTAGGAGAAATGAAGGTGATTTCCCATATACTGGCAATGGCATTTTGGTGAGCCGGAGGCAATTGGTTCATGAATGTGGCCCCACATGTCAGTGTTTCCCCAACTGCAAAAATCGAGTATCCCAAACTGGTTTAAAGCACCACATGGAAGTGTTCAAAACAAAGGATCGAGGGTGGGGTCTCCGATCACTGGATCCTATTCGTTGTGGTACTTTTATTTGTGAATATGCGGGAGAAGTTGTTGACAGAGCCAAGGTAAGTCAGCTTGCAAGGGAAGGTGATGAGTATGTTTTTGATACAACCCGTATTTACAGTGAATTCAAGTGGAATTATGAACCTAAGTTGTTGGAAGAAGTCGGTCCCAATGACGCTAGTGAGGAATATTCCCTGCCGTATCCTTTAGTTATAACTGCCAAGAATGTTGGTAATGTAGCCAGATTCATGAATCATAGTTGCTCCCCGAACGTCTTTTGGCAGCCTGTGTTATATGAAGAAAACAACCAATCCTACCTCCATGTTGCTTTTTTTGCACTCAGACACATTCCACCAATGACAGAGTTAACGTATGATTATGGATTTGCCCGGTCTGAACATGCGGAGGGTAGCAGTGCAGTCAAAGGGAGAAAGAAATGCTTATGTGGATCATCAAAATGCCGTGGTTCTTTTGGTTAA 1998 0.4274 MEEVLGQNSVPPHGSIDKSRILDVKPLRSLIPIYSMSNQTPPADQYPSGFSPFFPFGAPQQTPTGVSTKGAATPAPLRAYRSPLGTGDSATMEGFNDQDTSGKKKRGRPLPQRHSRSDKPKKIQEPPVDLSAVVGFTAAQREDGSREVVNLVLMAFDALRRRLCQLEEAKELSSGSIKRADLKACNTLMTKGVRTNMTKRIGSVPGIEIGDIFFFRMELCVVGLHAPSMSGIDALHIMGEFEEETLAVSIVSSGEYDDDAEDSDVIIYTGQGGNFFKKDKHAIDQKLKRGNLALDKSSRQHNEIRVIRGMRDGINPNSKIYVYDGLYKIQDSWIEKAKGGGGVFKYKLIRNPGQPSAFNVWRSVQKWKSGSHSRAELIISDLSNGAESIPVSLVNEVDNVKAPTFFNYFHSLRHPKSFSLMQPSHGCTCPKACVPGDLNCSCIRRNEGDFPYTGNGILVSRRQLVHECGPTCQCFPNCKNRVSQTGLKHHMEVFKTKDRGWGLRSLDPIRCGTFICEYAGEVVDRAKVSQLAREGDEYVFDTTRIYSEFKWNYEPKLLEEVGPNDASEEYSLPYPLVITAKNVGNVARFMNHSCSPNVFWQPVLYEENNQSYLHVAFFALRHIPPMTELTYDYGFARSEHAEGSSAVKGRKKCLCGSSKCRGSFG 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01053 665 ProSiteProfiles Pre-SET domain profile. 425 486 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste3g01053 665 Gene3D SET domain 372 664 IPR046341 -
Pste3g01053 665 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 99 659 - -
Pste3g01053 665 SMART preset_2 379 473 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste3g01053 665 SUPERFAMILY SET domain 388 662 IPR046341 -
Pste3g01053 665 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 185 369 - -
Pste3g01053 665 ProSiteProfiles Post-SET domain profile. 649 665 IPR003616 -
Pste3g01053 665 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 60 665 IPR025794 GO:0016571
Pste3g01053 665 Pfam Pre-SET motif 383 481 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste3g01053 665 ProSiteProfiles YDG domain profile. 202 350 IPR003105 -
Pste3g01053 665 Pfam SET domain 500 634 IPR001214 GO:0005515
Pste3g01053 665 SUPERFAMILY PUA domain-like 184 371 IPR015947 -
Pste3g01053 665 MobiDBLite consensus disorder prediction 55 69 - -
Pste3g01053 665 Gene3D - 184 371 IPR036987 -
Pste3g01053 665 ProSiteProfiles SET domain profile. 489 634 IPR001214 GO:0005515
Pste3g01053 665 SMART set_7 489 640 IPR001214 GO:0005515
Pste3g01053 665 SMART G9a_1 197 354 IPR003105 -
Pste3g01053 665 MobiDBLite consensus disorder prediction 42 126 - -
Pste3g01053 665 Pfam SAD/SRA domain 201 354 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01053 Pste-Chr3 6784731 6786728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01053 1 665 Su(var)3-9 homologs AT1G73100 52.187 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste3g01053 SAD_SRA 2.8e-47 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01053 3 6784731 6786728 Pste1g00912 1 2840913 2843535 PCT