Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00803 TCTTCAAATATTGGAGTATTTATATGTATCAAATGCTCTGGTATACATAGAAGCCTAGGTGTCCACATATCAAAGGTTTTATCAATAAAGCTAGATCAATGGACAGATGCTCAAGTTGACGCATTGGTGAAGTTGGGTGGAAATACAGTAATCAATAAAAAGTACGAAGCTTGCTTTCCAAGTAATGTAAGAAAGCCAAAATCAAATTCTTCTATTGAGGAGCGCTTTGATTTTATTAGGAGAAAATATGAATTTCTACAATTTATGGACATTGAGGAGAGTTTAGCATGTCCTTTTATACCTTCTCATACAAGAAGTTCATCATATTCCCAAACCAGTTTCTTGCAAGGCAAAAAGTATTATGATAAACAACCAACTAAAAGCCGTATTGGGAATGCATTTCGAAATAGTTGGGGAAGAAAAGATTCTATATATAAGAGTTCAAAGAAAAGTAACTCATTGGTAGGTATGATTGAATTTGTGGGATTGATAAAGGTTAATGTGGTTAAAGGCACTAAACTTGCGATTCGTGATATAAAGTCTAGTGACCCTTATGTCATTGTATCTCTTGGTCATCAATCGGTGAAGACACATCTTGTGTATGATAAAGATACTTTCTCAACTGATGATTTTATGGGTGAGGCCGAAATAGACATTCAACCTCTAGTTGCAGCTGCAAAGGCATACGAGAAATCTACAATTAATGAGTCCATGCAACTTGGAAAATTGGTAGCTAATTATGACAACACTCTTATTAAAGATGCTATCATTTCCCTTGAAGATGGAAAGATCAAACAAGATATCTCAGTGAGGCTACAACATGTTGAGAGAGGTGTGCTTGATATTGAACTTGAATGTATTCCTCTAACTCAA 873 0.3494 SSNIGVFICIKCSGIHRSLGVHISKVLSIKLDQWTDAQVDALVKLGGNTVINKKYEACFPSNVRKPKSNSSIEERFDFIRRKYEFLQFMDIEESLACPFIPSHTRSSSYSQTSFLQGKKYYDKQPTKSRIGNAFRNSWGRKDSIYKSSKKSNSLVGMIEFVGLIKVNVVKGTKLAIRDIKSSDPYVIVSLGHQSVKTHLVYDKDTFSTDDFMGEAEIDIQPLVAAAKAYEKSTINESMQLGKLVANYDNTLIKDAIISLEDGKIKQDISVRLQHVERGVLDIELECIPLTQ 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00803 291 CDD ArfGap 1 83 - -
Pste3g00803 291 Gene3D C2 domain 145 199 IPR035892 -
Pste3g00803 291 Gene3D C2 domain 200 260 IPR035892 -
Pste3g00803 291 SMART arf_gap_3 1 96 IPR001164 GO:0005096
Pste3g00803 291 ProSiteProfiles ARF GTPase-activating proteins domain profile. 1 96 IPR001164 GO:0005096
Pste3g00803 291 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 161 226 IPR035892 -
Pste3g00803 291 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 1 198 IPR044518 GO:0005096|GO:0005543
Pste3g00803 291 Pfam C2 domain 200 224 IPR000008 -
Pste3g00803 291 Pfam C2 domain 163 198 IPR000008 -
Pste3g00803 291 Pfam Putative GTPase activating protein for Arf 1 89 IPR001164 GO:0005096
Pste3g00803 291 SUPERFAMILY ArfGap/RecO-like zinc finger 1 89 IPR037278 -
Pste3g00803 291 Gene3D Arf GTPase activating protein 1 95 IPR038508 -
Pste3g00803 291 PRINTS HIV Rev interacting protein signature 5 22 IPR001164 GO:0005096
Pste3g00803 291 PRINTS HIV Rev interacting protein signature 26 47 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00803 Pste-Chr3 4965144 4969137 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00803 3 4965144 4969137 Pste1g04344 1 28875828 28882247 PCT