Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00798 GTTGCATTCATTCCTGTTTTCTTTGTAACCCTATAATAAGCTGCCGCGCCGCCGCCGTCACCGCCGCACGCATCTCCGTTTCCAGTTCGGTTATCTCTAAGATCCTAAACAATCCTCTTTTGAAAACACACTGAGAAAAGTGAGGAAATGTTGGCATCATCATTGGTAGAGTCTCTAGTTCTTCAACTCCATGAGATCTCAGCTGTCAAATTTGGTAACTTCAAGCTCAAATCTGGCATCTTCTCACCAATCTACATAGATCTCCGCCTCATCATATCATACCCTTCTCTTCTCCAGAAAATCTCTCAAACCCTTATTTCCTCAGTCTCTTCCACATCATTTGACCTTGTATGCGGTGTCCCTTACACTGCTTTACCCATTGCCACATGTGTCTCTTTGGCTCAGAGCATTCCTATGGTCATGCGCCGCAAGGAAATCAAAGATTATGGTACTTCTAAAGCTATTGAAGGTGATTTCAAGTCTGGCCAAAGTTGTTTAATCATTGAGGATTTGGTTACCAGTGGCACATCGGTTTTGGAAACAGCAGCACCCCTGCGTGCTGTGGGGTTGAAGATTAGTGATGCAGTTGTTTTAATTGATAGAGAGCAAGGTGGGAGAGAGAATTTGGAGGAGAATGGCATCAAGTTGCATTCAATTATTAAATTGACAGAAATGGTGAAAATTTTGAGCAATCATGGGAAACTTGATCAGGAGATGGTAGGTGTTGTTATGAAATTCTTAGAGGATAATCGAAAGGTTGCTGCTCTGACAAAGGTGGAGAAGCCTGCAACTAAGGTCAAGGCTTTATCATTTGGAGAGAGGGCTAAGCTGTCAAAAAATCCGATGGGAAAGAGGTTGTTTGAGATAATGGCTAAGAAGGAGAGTAATCTGTGTTTGGCTGCCGATGTTGGAACTGCAGCTGAATTACTTGAAATTGCTGAGAAGGTTGGACCTGAGATATGCTTGCTGAAGACTCATGTGGATATTTTCCCAGATTTTACTCCTGATTTTGGTTCTAAGCTTCTCTCGGATCGCAAATTTGCTGATATTGGTAACACGGTGACCATGCAATATGAAGGAGGGGTCTTTCGGATATTGGATTGGGCTCATATAGTAAATGCTCACATAATCTCAGGTCCTGGAATTGTTGATGGATTAAAATTGAAGGGTTTACCTCGTGGCAGGGCTCTATTATTGCTTGCTGAAATGAGTTCAGCTGGTAACCTTGCCAAGGGAGATTACACCAGTGCTGCAGTAAAAATTGCTGAGGATCATTCTGACTTTGTGATTGGCTTCATCTCAGTCAATCCAGCATCATGGCCAGGGGCACCTATAAATCCTTCTTTCATTCAGGCAACCCCTGGAGTTCAAATGGTAACCGGTGGTGATGCTTTAGGGCAGCAATATAACACTCCATATTCGGTGGTCCATGACAGGGGCAGTGACATCATCATCGTTGGACGCGGCATCATCAAAGCAGCAAATCCTGCAGAGGCAGCTCGTGAATACCGTGTTCAAGGATGGAATGCATATTTGGCCAAATGCACTTGATTGATGCCTGCATTCTTAGAATAAAAGGATGAGCCAAAATTATGTTTGAATGGGACGGGACATTAATCTCACTGTAACCCAGAGGAAGGTGGTCTTGGATACAGTATAATGTTGAAGACATTTTTCAGTTGGAAGATTGAAGTGGATTTACTTGGGAATTAAGTAAAAATAGCAAGATGGAATTTCATATAATTTTCCCATAATAAATATGAAGGAATTGAGATATATAAACTCCTCTACACTGAG 1797 0.4235 MLASSLVESLVLQLHEISAVKFGNFKLKSGIFSPIYIDLRLIISYPSLLQKISQTLISSVSSTSFDLVCGVPYTALPIATCVSLAQSIPMVMRRKEIKDYGTSKAIEGDFKSGQSCLIIEDLVTSGTSVLETAAPLRAVGLKISDAVVLIDREQGGRENLEENGIKLHSIIKLTEMVKILSNHGKLDQEMVGVVMKFLEDNRKVAALTKVEKPATKVKALSFGERAKLSKNPMGKRLFEIMAKKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDIFPDFTPDFGSKLLSDRKFADIGNTVTMQYEGGVFRILDWAHIVNAHIISGPGIVDGLKLKGLPRGRALLLLAEMSSAGNLAKGDYTSAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQMVTGGDALGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAREYRVQGWNAYLAKCT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00798 467 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 234 IPR023031 GO:0004588|GO:0006221
Pste3g00798 467 Pfam Phosphoribosyl transferase domain 56 158 IPR000836 -
Pste3g00798 467 SUPERFAMILY Ribulose-phoshate binding barrel 220 463 IPR011060 -
Pste3g00798 467 Gene3D Aldolase class I 216 467 IPR013785 -
Pste3g00798 467 FunFam Uridine monophosphate synthetase 217 467 - -
Pste3g00798 467 Gene3D - 3 212 IPR029057 -
Pste3g00798 467 NCBIfam orotate phosphoribosyltransferase 14 175 IPR004467 GO:0004588
Pste3g00798 467 CDD OMP_decarboxylase_like 248 454 - -
Pste3g00798 467 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 292 305 IPR018089 GO:0004590|GO:0006207
Pste3g00798 467 SMART OMPdecase_2 247 454 IPR001754 GO:0004590|GO:0006207
Pste3g00798 467 FunFam Uridine monophosphate synthetase 3 207 - -
Pste3g00798 467 NCBIfam orotidine-5'-phosphate decarboxylase 248 455 IPR014732 GO:0004590|GO:0044205
Pste3g00798 467 CDD PRTases_typeI 65 172 IPR000836 -
Pste3g00798 467 SUPERFAMILY PRTase-like 5 200 IPR029057 -
Pste3g00798 467 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 4 466 - -
Pste3g00798 467 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 246 454 IPR001754 GO:0004590|GO:0006207
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00798 Pste-Chr3 4946268 4952327 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00798 3 4946268 4952327 Pste3g00798 3 4946268 4952327 ECH
Pste3g00798 3 4946268 4952327 Pste1g04343 1 28856733 28860331 PCT