Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03268 GAGTGCTTTTCCCCCACCAGTCTAATTTAGCCTCACTACCTCAAACCTCTCCAACAACAATGGCTAGAAAATCTTTGGCATGGTCCTTGCTTCTGGGGATGGTTTGTTCCATTGTACTTGGTTCATATGACGAGAGTTTGCCTCCTAGGACAATTTCCAGTGGCAACTATCTTGAAGCAATACAAAGATTGCAGTCATTTAAGGCCTCTCTAACTAGACATGATTCCATTGCTTCAGTTACTTCCCTATCACCCTCCCCAAGCCCTTCTGCTACTGCTCCAGCTCCTTCTCCTTCTCCCCTCCCACTTCAGGGTGCGATCAATCCACGTGTGTACCATGTGACATCTTATGGTGCGGATCCAACTGGTAATTCAGATAGCACTGAAGCTCTCCTTGCAGCCATAGAGGATGCTGCCAAGGGTCCTAGTGAAGGATATTTGATGCAAGGCATCAGAGACCTTGGAGGTGCCCAGATTAACCTTGAGGGTGGAAGTTACTTGATCAGCCGGTCGCTGCGGTTGCCGGTAGCCGGGGTTGGGAATCTTATGATTCATGGGGGAACAATAAGAGCCTCAGGTGATTTTTCAACAAATGGCTATATCATTGATTTGTCACCCTCTTCTAATGAAGGAAACACAACGAGTTCCTCTTCACCATCCTACAATTTTGAGTTCATAACTCTCAAGGACCTCTTGTTGGACTCAAACTTCAGGGGAGGAGGCATTTCAGTCATAAACTCACTTAGGACCAACATAGACAATTGTTACATCACACATTTCACAACCAATGGAATTTTAGTCCAAAGTGGCCACGAAACCTACATCAGGAACTCTTTCCTTGGTCAGCATATAACTGCTGGCGGGGACAAAAATGAGAGGGACTTCTCAGGCACAGGAATAAATCTCCAGGGTAATGACAACGCTGTTACAGATGTTGTAATTTTCTCTGCTGCTATAGGAATAATGGTTACTGGTCAGGCCAATGCTTTTTCTGGAGTACACTGTTACAATAAGGCCACTGGCTTTGGAGGTACTGGGATTTATTTGAAACTACCCGGTTTGACACAAACCAGGATTGTGAATTCTTACATGGATTACACTACTATTGTGGCAGAAGACCCGGTTCAACTCCATATCTCAAGCAGTTTCTTCCTTGGTGATGCCAATATTGTCCTAAAGTCCAAGAATGGAATTGTAAATGGTGTTAATATTGTTGATAACATGTTCTCAGGTTCAAATCAGGGGGTTGAAATTGTTCAGTTGGACCAATCAAATAGTCCTTTCCATCAAATTGATCAAATTATTGTTGATAGAAACGTTGCAAGGGGGATGAAGTTAAAGGCTACGGTAGCAAAAATGTCTATGCAAGGGAATGGAACCTCATATACTGTTGATTTTAACAATATTTTGCTTTTTCCTGACCGAATAAAAAATGTACAGTACTCTTTAAGCTCTACGGGTAGCACCTTCCCCAGTCATGCTCTGAGGAATGTGTCTGAGAATCGCGTTGTGATTGAAACAAATGAAGCAGTAGCTGCCAATGTTTTTGTTACGGTGGATCAAAGTGTAGCAAGTTGAAGAAGGTTTGAAGCTGGTGACCAAAAAGTTTGGTCAAGACTAGACTCAAGAGGGAATTGTGCATACCTTAGTTGTGAACTTTTTCTTTCTTCGGATCAATTTAAAGTAACACTAGTAGTAACATATACAGTATATACTAAACACTGCTACAAAATTTAGAAAATTTATATAGATTGACTGAACCACACATTATACTGTAATTGAATGAAAAACATTGTATCGATAGAAGATATACGTTTTCAATAGTTTATTGTAAAACTGGTTCTAGGTTGAATCAATACTAGCATACTTTTCTCATTACAGAGAGTTCAAAAAAGAGAATTTTATTATAG 1909 0.4091 MARKSLAWSLLLGMVCSIVLGSYDESLPPRTISSGNYLEAIQRLQSFKASLTRHDSIASVTSLSPSPSPSATAPAPSPSPLPLQGAINPRVYHVTSYGADPTGNSDSTEALLAAIEDAAKGPSEGYLMQGIRDLGGAQINLEGGSYLISRSLRLPVAGVGNLMIHGGTIRASGDFSTNGYIIDLSPSSNEGNTTSSSSPSYNFEFITLKDLLLDSNFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETYIRNSFLGQHITAGGDKNERDFSGTGINLQGNDNAVTDVVIFSAAIGIMVTGQANAFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTTIVAEDPVQLHISSSFFLGDANIVLKSKNGIVNGVNIVDNMFSGSNQGVEIVQLDQSNSPFHQIDQIIVDRNVARGMKLKATVAKMSMQGNGTSYTVDFNNILLFPDRIKNVQYSLSSTGSTFPSHALRNVSENRVVIETNEAVAANVFVTVDQSVAS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03268 505 PANTHER POLYGALACTURONASE QRT3 32 503 IPR039279 GO:0004650
Pste2g03268 505 SMART pbh1 379 400 IPR006626 -
Pste2g03268 505 SMART pbh1 284 305 IPR006626 -
Pste2g03268 505 SMART pbh1 159 184 IPR006626 -
Pste2g03268 505 SMART pbh1 227 249 IPR006626 -
Pste2g03268 505 SUPERFAMILY Pectin lyase-like 90 435 IPR011050 -
Pste2g03268 505 Gene3D - 91 504 IPR012334 -
Pste2g03268 505 MobiDBLite consensus disorder prediction 69 83 - -
Pste2g03268 505 MobiDBLite consensus disorder prediction 59 84 - -
Pste2g03268 505 FunFam Polygalacturonase QRT3 94 496 - -
Pste2g03268 505 Pfam Pectate lyase superfamily protein 94 321 IPR024535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03268 Pste-Chr2 32562249 32564785 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03268 2 32562249 32564785 Pste2g03268 2 32562249 32564785 ECH