Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03055 ATGTCCAGCGAAGCAAGGGAGAATATCGAAAACCCTAAACTCCTCTCCGCCTCCGACATCCTAGAAGAATTAGATACCCACACCCACATTGTACCCTGTTCCTGTTGGGTAAAGTCATTAAGTAGCTTCACTCTAATTTTGAGAATGCGAAAGCACGTTTTCCACGCCACTTTGTTCCTCTCATTAGTTGTCCAGGCAGTGTCAAAATCGACGATCGAGCCATGTTCGAACTCAGACTCATGCAACGCGCTCCTAGGATACAGTCTCTACACCGACCTCAAAGTCTCCGAAGTGGCGTCCCTGTTCCAAATCGACCCCATCGCTGTCCTCACGGCCAACGCCATCGACATCTCGTACCCCGACGTGGAGCACCACATCCTCCCTTCAAAGCTCTTCCTCAAAATCCCCATCTCCTGCTCCTGCGTCGACGGCATTCGCAAGTCCGTCTCCACCCACTACAAGACCCGCCCCTCCGACACCCTCTCCTCCATCGCCGACTCCATCTACGCCGGTCTCGTCTCCTCCGACCAGCTCCGAGACGCCAATTCCATTTCTGACCCTTCCGTCCTCGATGTCGGACAGACCCTCCTTGTTCCTCTTCCCTGCACTTGCTTCAACGGCACTGATAACTCTCTCCCCGCCATTTACCTCTCTTATGTCGTTCGCCCCGTTGATACCCTCCCCGCCATTGCTGCCAGGTACTTCACCACTCTTACCGATTTGATGACTGTTAATGCCATGGGAACCACTGCTGTTAACGACGGCGATATCCTTGCTGTTCCAATCCCCGCTTGTGCCTCGAATTTTCCGAAATCTTCCTCTGATTTTGGTTTGCTTGTCCCCAATGGAAGTTATGCCCTTACCGCCGGTCATTGTGTGCAGTGTAGCTGTGGACCCAGAAACTTGAATTTGTACTGTATGCCGGCTTCTCTGGCTGTTTCTTGCTCCAGCATGCAATGTAGAGGCAGTAACCTTATGCTTGGGAATGTCACGGTGCAGCAGACTAGTGGCGGTTGCAATGTTACTTCTTGCAATTATGATGGCATTGTTAATGGCACCATTGTAACAACGTTATCCCCTTCTCTTCAGCCTCGATGTCCAGGGGCGCAGGAATTTCCTCCCCTTAGTGAACCACCTACAACTGTTGCAAAGGACACAGTGTTTGCACCAGCACCAGCACCAATGTTGGATGGAGCTGGTGGTTCAGCATCACCCAAATCCTCGTTGGTGCCTTCAACGGGGCTTCCAGGGTTCTCTCCTGCAAATGGCCCTATTAGCGGCATGTCGTCTGGTGCCTCTGCTGCATGCTCCTTGGTGAAACCATTGCCCACTTTGACGTATGCACTTGCTCTATGCCTTTTCAAGTTGATGATTCCTGTGTCATTGTAATCTTCTCAATTTTGTGGTGGGTTTAGTTGGCCTCTGCTATCTTTGCCACGGCTGCTCCTGTCTATTGTAGTTGCTGATATTCATTTTGTACTCTTGAACTGATTCGTGAATCTGAAAAACTATTGAGGTTTCGGGTTTCATCGAACGGGTAGCCATTACTCTAATCTCACTCGGATAACTAATAGTAAAACAAG 1583 0.5035 MSSEARENIENPKLLSASDILEELDTHTHIVPCSCWVKSLSSFTLILRMRKHVFHATLFLSLVVQAVSKSTIEPCSNSDSCNALLGYSLYTDLKVSEVASLFQIDPIAVLTANAIDISYPDVEHHILPSKLFLKIPISCSCVDGIRKSVSTHYKTRPSDTLSSIADSIYAGLVSSDQLRDANSISDPSVLDVGQTLLVPLPCTCFNGTDNSLPAIYLSYVVRPVDTLPAIAARYFTTLTDLMTVNAMGTTAVNDGDILAVPIPACASNFPKSSSDFGLLVPNGSYALTAGHCVQCSCGPRNLNLYCMPASLAVSCSSMQCRGSNLMLGNVTVQQTSGGCNVTSCNYDGIVNGTIVTTLSPSLQPRCPGAQEFPPLSEPPTTVAKDTVFAPAPAPMLDGAGGSASPKSSLVPSTGLPGFSPANGPISGMSSGASAACSLVKPLPTLTYALALCLFKLMIPVSL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03055 462 Gene3D LysM domain 147 207 IPR036779 -
Pste2g03055 462 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 54 370 - -
Pste2g03055 462 Pfam LysM domain 219 249 IPR018392 -
Pste2g03055 462 Pfam LysM domain 153 199 IPR018392 -
Pste2g03055 462 ProSiteProfiles LysM domain profile. 151 198 IPR018392 -
Pste2g03055 462 ProSiteProfiles LysM domain profile. 217 260 IPR018392 -
Pste2g03055 462 SUPERFAMILY LysM domain 151 200 IPR036779 -
Pste2g03055 462 CDD LysM 151 198 IPR018392 -
Pste2g03055 462 SUPERFAMILY LysM domain 217 262 IPR036779 -
Pste2g03055 462 Gene3D LysM domain 208 273 IPR036779 -
Pste2g03055 462 CDD LysM 218 245 IPR018392 -
Pste2g03055 462 SMART LysM_2 152 199 IPR018392 -
Pste2g03055 462 SMART LysM_2 218 261 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03055 Pste-Chr2 30560769 30563400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03055 61 458 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 68.000 0.0 552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03055 2 30560769 30563400 Pste2g03055 2 30560769 30563400 ECH