Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02021 ATGGAGCAAGGCGGTGACATGAATAAGCAGCCTCAGGATTCAACAGTGAAAGAAATTCAACAAGGTGATGCACAAGTTCAGGTTCAAGCACCTCAACAACCCCAAAAGTGTCCTCGATGCGAGTCGCTCAACACCAAATTTTGCTATTACAACAACTATAGCCTGTCCCAGCCTCGTTACTTTTGCAAAACATGCAGGAGGTACTGGACTCAAGGTGGAACCTTAAGGAACGTTCCCGTTGGTGGTGGTTGCCGCAAGGGTAAGCGCGCCAAAAGTTGTAATTCATCTTCGTCGGAGAATTCCTCTTCCCGGCGACTGCCACAACAACAAGCGCAGGAGGTGGTGGTTCAAACTCAAGCACCACCCTTAACAACGGTGGTGAGGACTAAAGACCCTTCTTCGATTATGGCTTCACCCTTCTACCAAAGTGGTGGGTACTTGTCTTCTCTGGCTGCTATGCATTCACTCAATCCATCATCAATCCCTTTTGATCATGTTGCGGGTAGTGATGCCTTGCGTTCTTCCAATTTGGGCCTTCTATCTGGTTTCAATGTCCAGCGCCCAATTGGGCCAATTCATCCACCCCGTCTTTATGAAATGGGGAGTGGCGAAAGGGAGGAGGTGGTGCCTCTGTATGAACAAGGTTTGGTAAATCCTTCATCCACTAATACTAATAGCAGTGTTGTTTCTCAGCATGATTGGCCTCAGAGCTTAGTCAATAATAGTAATGCTAGTAATAGGGCCTCCGATGCCTCTTTGTGGAGCACCGTCAGCACCACTATTGGCGGTAACTCTGAGAGGACTAGAACTAGTGGTTCTGCTTCTTCTTTGGTTCCAAATCAATGGCCTGCTCTTCCAGGGTATGGCTCTCCACCGTGA 879 0.4824 MEQGGDMNKQPQDSTVKEIQQGDAQVQVQAPQQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAKSCNSSSSENSSSRRLPQQQAQEVVVQTQAPPLTTVVRTKDPSSIMASPFYQSGGYLSSLAAMHSLNPSSIPFDHVAGSDALRSSNLGLLSGFNVQRPIGPIHPPRLYEMGSGEREEVVPLYEQGLVNPSSTNTNSSVVSQHDWPQSLVNNSNASNRASDASLWSTVSTTIGGNSERTRTSGSASSLVPNQWPALPGYGSPP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02021 292 MobiDBLite consensus disorder prediction 1 31 - -
Pste2g02021 292 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
Pste2g02021 292 MobiDBLite consensus disorder prediction 262 292 - -
Pste2g02021 292 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Pste2g02021 292 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 215 IPR045174 GO:0003700|GO:0006355
Pste2g02021 292 MobiDBLite consensus disorder prediction 90 111 - -
Pste2g02021 292 MobiDBLite consensus disorder prediction 80 111 - -
Pste2g02021 292 MobiDBLite consensus disorder prediction 262 280 - -
Pste2g02021 292 Pfam Dof domain, zinc finger 33 89 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02021 Pste-Chr2 20395452 20396330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02021 8 120 C2C2-Dof Transcription Factor Family AT5G60200 53.982 5.86e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste2g02021 zf-Dof 1.2e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02021 2 20395452 20396330 Pste2g02021 2 20395452 20396330 ECH
Pste3g03881 3 31557289 31559315 Pste2g02021 2 20395452 20396330 PCT