Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01959 ATGGGTTTGAGTTGCAAGCAAGTTTCTAATAGAGGGCTTGATTGGAACCAGACCTTGTTGCAGGCTCAAAACTTGGAGCTCCTAAAGCCTCCTCCAATGAAGAAACAACAGCAACAAAGTCAGCCATCAGAGCCTTTGAAGTGTCCAAGATGCGACTCTATTAACACCAAATTTTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGAGCTTGCAAGAGGCACTGGACAAAAGGTGGAACTCTCCGCAATGTTCCTGTCGGCGGCGGAAGGAAGAATAAGCGAGTAAAGAAATCAACCACAGCCACAGTCACAGCCACAGCCACAGCCACAGCCACCAATTCTATTGGTACCATCTCCTCCTCAAATGCCAACATGCATGGTGAGTTGAGCACCCACATCACAATTCCTCCTCCTGCAGTGGATGATCACAAAATCACAGCTTCTTCTCTCTATCAATCTCTGTGCCTGCCACAACAAAATCTGATGAGTACTGATGACTCAGAAGGCAAAGACTTTGGTATTGGGAATGGTATCTTTCTGAGTTCAACCGAGCCTTTTCCTCAAAACCAAAGCCTTCTCTTTCCCTTCACAACGTCAAACTCTTTTGATACAAACCAATGTGCAATATCAACATCTTTGAGATCCTCCAGTGTGTATAACTATGGTGAAGAGTTTAAAATAACGGAAGAACCAACCATCAACAGTGTAATCCCCAGCACCAGTGGCGGCACCGACACACAGCAATGGGAGATAGCTGCAACAACTTCTGGCTTGGAAATGTCAAACTATTGGATTTGGGACGACATTGATTCTTTGGTATCAACTGATCTAAATGTTCCTTGGGATGATTCTGATATCAAACCCTGA 882 0.4467 MGLSCKQVSNRGLDWNQTLLQAQNLELLKPPPMKKQQQQSQPSEPLKCPRCDSINTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSTTATVTATATATATNSIGTISSSNANMHGELSTHITIPPPAVDDHKITASSLYQSLCLPQQNLMSTDDSEGKDFGIGNGIFLSSTEPFPQNQSLLFPFTTSNSFDTNQCAISTSLRSSSVYNYGEEFKITEEPTINSVIPSTSGGTDTQQWEIAATTSGLEMSNYWIWDDIDSLVSTDLNVPWDDSDIKP 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01959 293 ProSiteProfiles Zinc finger Dof-type profile. 46 100 IPR003851 GO:0003677|GO:0006355
Pste2g01959 293 ProSitePatterns Zinc finger Dof-type signature. 48 84 IPR003851 GO:0003677|GO:0006355
Pste2g01959 293 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 33 216 IPR045174 GO:0003700|GO:0006355
Pste2g01959 293 Pfam Dof domain, zinc finger 45 98 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01959 Pste-Chr2 19870696 19871577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01959 46 102 C2C2-Dof Transcription Factor Family AT1G28310 84.483 6.82e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste2g01959 zf-Dof 1.2e-31 No_clan