Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01165 TTTGAATTAATGTGAATCCAAATTGAAAGAATCCACCAACATTCTTTTCGCATTGCAGCTATTATTCTCAGAAAAAAAAAAGAAAAAGAAAAAAGAAATAAAGTTGAATTTTCAGATCTCAGAATGGGACTTGCAGAAGAAGATTGGGTTAATGGCCTGGAATAGCGCCAAAGTCAGTTGATATCGTCGGTTAGCACTTAGCAGTGCACATTGCAGCATCATCGTGTGCTTTTGCAAATTGCCGCTGCATTAGGTTCAAAACCAACGGTACCGCGTTTCTTAAAAGGTGTGCGCTGCTGTTGAACGGAGGAGAAGATGTTGTGCGCTTGTTCTTCCGGGGAGCAATTCAAATTCGAAGAGCCGCCGCAGTCGCCGGAGTCCCTTGCCACCAGGGATTTCTCCGCCAGTGGACTCTCTTCCAGGACCGGAGAATGGGAATCTAAATTCGATGAAACTCAAGTTGAACAAGCTGAATCTACTCTTAAAGAAGCTCTTTCCTTAAACTACGAGGAGGCTAGGGCTTTGTTGGGGAGGCTTGAATACCAAAGAGGGAACTACGATGCTGCACTTCAAGTATTTCAGGGTATAGACATTAAGGGTTTGACACCGAGAATGATCAAGGCTATTGCTGAACGAACCAAGCAAAGGAAACCCCGTTCCAAGGGAGATATTGTGGTTCTGAATGTAATGTCATTGCATTCGGTTAGCCTACTTCTTGAGGCAATATTACTTAAAGCTAGATCGATGGAGGAACTTGGACGATTCATTGAGGCGGCAAAGGAGTGCAGAATAATTCTAGATACGGTTGAATCTGCCTTTCCAAATGGAATGCCTGAGGGTATTAGTGAAGATTGTAAGTTACAAGAGATCTTTCATAAAGCATTGGAGTTGCTTCCAAGCCTTTGGATCAAGGCAGGGTTTCTAGATGAAGCTGTCACTGCGTATCGTCGTGCTCTAGTCAAGCCATGGAATTTGAAGCCACAAAGGTTGGCTGCTGTACAAAAAGATTTAGCTACGATACTACTCTATGGCGGTGTTGAGGTAAGCCTACCCCCTCAATTGCAGGAGCGGGGTAAGGCAACTCCTAAGAGTAATGTTGAAGAAGCAATACTTCTGCTATTAATACTCATGAGCAAGGTGGCAATTCGGGAAATAGACTGGGATGCTGAAATAATGGATCATCTTACTTTTGCACTTTCAGTGACTGGGATGTTTGAGTTATTGGCAGATCATGTAGAGCAGATCCTTCCAGGTATCTATAGTCGAGCTGAGAGGTGGTACATTCTTGCTCTGTGTTATAGTGCAGCAGGACATGATGAGGTAGCATTGAACCTTTTGAGGAAGGCTTGCAGCAGTTCTGAAGCAAACCATAGACCCCATTTTCCGTCATTTTTGTTTGGAGCAAAACTCTGTTCCCTAGATTCCTGCCATGCTCATGAAGGCATTAACTTTTCACGTGAAGCTATTGATCTAGCTAAGCACCAAAATGAGCATTTTCTGGGTCAAGGCCATAAATTTCTTGGCATCTGCTATGGGGCTGCAGCTAGAATTTCTGTACTGGATTCTGAAAGAAGTATATTTCAAAGAGAGTCTTTGAACTCTCTAAACTGTGCTGCTGTAAATGGAAATGATAATCTGGAAGCAATTCTCAGTCTTGGACTGGAAAATGCCATTCAAAGGAATCTGGATGCAGCATACAACAACATAATGATGTACTCAGACATGACTGTTGGCAGTTCAAGAGGTTGGCAGCTGTTAGCACTCATAATATCTGCACAGCAGCGGTTTAAAGAAGCTGAAACTATAGTTGATTTTGCATTAGATGATGCTGGGGGGATGGATCAACTTGAACTTCTAAGATTGAAAGCAGTACTTGAAATTGCTCAGCAGCAACCCAAGCAAGCAATAGAGACATATAGGATCTTGCTAGCATTAATTCAAGCAAAAAAGGAGCGTTGGCTTCAAGATAACAACATTGATCAAGAACAAGCATTCAGGCTCGAGGCATTAACAGAAAGGAAGTTGGAAATGGAAGCCTGGCAGGATTTGGCTACCATTTATAGAGATGTTGGTTCCTTGCTTGATGCAAAAACTTGTGTTGACACAGCCAAGTTGATAGAATTTTTCTCTCCTAGAAGTTGGCATATTACAGGGATGTTGCTTGAAACTCAATTGTTATACAAAGAAGCATTTGTTTCCTTTTCGGTATCATTGTCAATTGAACCAGATTACATTCCCAGTATCATTTCAACTGCAGAATTGTTGATGAAGCTTGGTATGCAATCACTTCCGATTGCAAGAAGTTTTTTAATGAACGCTTTGCGATTAGAACCTACTAACCATGATGCTTGGTTCAACCTTGGATTGGTTTCAAAAATGGAAGGTTCATTACAGCAAGCAGCAGAGTTCTTTCAAGCCGCTTATGAACTGAAGCTTTCTGCTCCAGTGCAAAAATTTAAGTAATTGAGACTTTGGAAAATCACCCTTACCGTTTTTGGTCCAGGGAAAGTCAGCTTGACTAAGGCATGATAAAAAACAGGCGAGCAGCAACT 2552 0.4197 MLCACSSGEQFKFEEPPQSPESLATRDFSASGLSSRTGEWESKFDETQVEQAESTLKEALSLNYEEARALLGRLEYQRGNYDAALQVFQGIDIKGLTPRMIKAIAERTKQRKPRSKGDIVVLNVMSLHSVSLLLEAILLKARSMEELGRFIEAAKECRIILDTVESAFPNGMPEGISEDCKLQEIFHKALELLPSLWIKAGFLDEAVTAYRRALVKPWNLKPQRLAAVQKDLATILLYGGVEVSLPPQLQERGKATPKSNVEEAILLLLILMSKVAIREIDWDAEIMDHLTFALSVTGMFELLADHVEQILPGIYSRAERWYILALCYSAAGHDEVALNLLRKACSSSEANHRPHFPSFLFGAKLCSLDSCHAHEGINFSREAIDLAKHQNEHFLGQGHKFLGICYGAAARISVLDSERSIFQRESLNSLNCAAVNGNDNLEAILSLGLENAIQRNLDAAYNNIMMYSDMTVGSSRGWQLLALIISAQQRFKEAETIVDFALDDAGGMDQLELLRLKAVLEIAQQQPKQAIETYRILLALIQAKKERWLQDNNIDQEQAFRLEALTERKLEMEAWQDLATIYRDVGSLLDAKTCVDTAKLIEFFSPRSWHITGMLLETQLLYKEAFVSFSVSLSIEPDYIPSIISTAELLMKLGMQSLPIARSFLMNALRLEPTNHDAWFNLGLVSKMEGSLQQAAEFFQAAYELKLSAPVQKFK 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01165 715 PANTHER PROTEIN NPG1 1 715 IPR043376 -
Pste2g01165 715 Pfam Tetratricopeptide repeat 46 90 - -
Pste2g01165 715 SUPERFAMILY TPR-like 46 242 IPR011990 GO:0005515
Pste2g01165 715 Gene3D Tetratricopeptide repeat domain 36 413 IPR011990 GO:0005515
Pste2g01165 715 Gene3D Tetratricopeptide repeat domain 423 710 IPR011990 GO:0005515
Pste2g01165 715 Coils Coil 57 77 - -
Pste2g01165 715 ProSiteProfiles TPR repeat profile. 676 709 IPR019734 GO:0005515
Pste2g01165 715 SMART tpr_5 511 544 IPR019734 GO:0005515
Pste2g01165 715 SMART tpr_5 318 351 IPR019734 GO:0005515
Pste2g01165 715 SMART tpr_5 676 709 IPR019734 GO:0005515
Pste2g01165 715 SMART tpr_5 606 639 IPR019734 GO:0005515
Pste2g01165 715 MobiDBLite consensus disorder prediction 5 43 - -
Pste2g01165 715 SUPERFAMILY TPR-like 564 706 IPR011990 GO:0005515
Pste2g01165 715 MobiDBLite consensus disorder prediction 22 38 - -
Pste2g01165 715 SUPERFAMILY TPR-like 318 598 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01165 Pste-Chr2 12698870 12702418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01165 1 714 Calmodulin-binding Proteins AT1G27460 59.527 0.0 853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01165 2 12698870 12702418 Pste2g01165 2 12698870 12702418 ECH
Pste8g00794 8 4067411 4071035 Pste2g01165 2 12698870 12702418 PCT