Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01147 CTGGGAGTGGGAGCTTTGAGAAACTCTTGATCCAGTACAAATAACGATGTATGCAGCACGCGTTTAAAGAGACTCGTCGCACGTGCTACTCCCTCCCAGTCAACTTTGAATATGTTCACGTGTCACCCAAGAGGACACTGGAGCCAGAGAACCCCCTGCCAGTCCCATTCCCATATATTTGGCACCTAATTCTTTTCCCTTGCTTTTGCTTTCTCTTTAATTTGGCGAAACCCAACAATTACGAATTAGGATTGACATTGAAAGCGTGGGGGAGGGCCATGTTCAGCAGCGTAAACAACGAGGATTCCTTTTCCGCTTTCAGCGACTGCAACAGCGACAGATCCGGCGAATTCCCGGGGGCGTCTTCGGAGAGCCGCCGCCTCCTGATCGCCTGCGCCTCCGAGAATTCCGACGAATTCATTAGCCAACTGGTTCAGAAGCTCGACTCCTGTTCCATTGAGGAACAAAAACAGGCCACCATGGAAATCAGGTTACTGGCGAAGAACAAGCAAGAGAACCGCCTGAAAATCGCAAAAGCAGGAGCCATTAAAGCATTAATTAGGCTTCTATCGTGCTCATCGGACCATCAGCTTCAGGAGTATGTGGTGACGGCGATTCTGAATCTGTCCCTCTGCGACGAGAACAAAGAGGCTATCGCATCTGCGGGAGCGGTGAAGGCTCTGGTTGGAGCACTGGAAACAGGGACGGAGACAGCGAAGGAGAACGCGGCGTGCGCGTTGCTTCGGCTGGCGCATAAAGAGGAGAACAAGGTGGCCATAGGGAGGGCGGGGGCGATTCCTTGGCTGGTGAAGCTTCTAGAAGGAGGAGGATTGCGCGGGAAGAAGGACGCGGCGACTGCGCTGTACGCGCTGTGTTCGGTGAAGGAGAACAAGGTGAGGGCGGTGAGGGCGGGGATGATGAGGGCGCTGGTGGAGCTGATGGCGGACTTAGGGTCGAGCATGGTGGAGAAGGCGGCGTACGTGGTGAGCGTGGTGGTGTCGGCGGCGGAGGCGAGAGCAGCGTTGGTGGAGGAGGGAGGGATTCAGGTGCTGGTGGAGATAGTGGAGGTGGGGACGCAGAGGCAGAAGGATATAGCGGTTGGGGTATTGCTGCATATATGTGAGGAGAGTGTGGTGTACCGTAGAATGGTGTCCCGCGAAGGAGCCATTCCTCCCTTGGTTGCTTTGTCGCAGTCACAATCCAATCGCGCCAAGCACAAGGCTGAGAAACTAATAGAGCTTCTACGGCAACCAAGATCCGGCAATGGCGGTGGTCGTACCTCGGAAATGTCGGCATAAACCCTACTCTTTGTGCCCACCAATCCAACACATCACCCCAAACACACTTGTAATTAATTCCTTTGTATAACTGCCATCTAAATTATGTCACCTTGCTTGCTACTCTATTTCTTTTGCTTCGCTTCCTTTTTTACGAATATAATATAGCCTCC 1450 0.531 MQHAFKETRRTCYSLPVNFEYVHVSPKRTLEPENPLPVPFPYIWHLILFPCFCFLFNLAKPNNYELGLTLKAWGRAMFSSVNNEDSFSAFSDCNSDRSGEFPGASSESRRLLIACASENSDEFISQLVQKLDSCSIEEQKQATMEIRLLAKNKQENRLKIAKAGAIKALIRLLSCSSDHQLQEYVVTAILNLSLCDENKEAIASAGAVKALVGALETGTETAKENAACALLRLAHKEENKVAIGRAGAIPWLVKLLEGGGLRGKKDAATALYALCSVKENKVRAVRAGMMRALVELMADLGSSMVEKAAYVVSVVVSAAEARAALVEEGGIQVLVEIVEVGTQRQKDIAVGVLLHICEESVVYRRMVSREGAIPPLVALSQSQSNRAKHKAEKLIELLRQPRSGNGGGRTSEMSA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01147 415 Pfam Armadillo/beta-catenin-like repeat 196 234 IPR000225 GO:0005515
Pste2g01147 415 Pfam Armadillo/beta-catenin-like repeat 154 193 IPR000225 GO:0005515
Pste2g01147 415 Gene3D - 112 208 IPR011989 -
Pste2g01147 415 FunFam U-box domain-containing protein 4 239 406 - -
Pste2g01147 415 SUPERFAMILY ARM repeat 120 395 IPR016024 -
Pste2g01147 415 SMART arm_5 277 317 IPR000225 GO:0005515
Pste2g01147 415 SMART arm_5 236 276 IPR000225 GO:0005515
Pste2g01147 415 SMART arm_5 195 235 IPR000225 GO:0005515
Pste2g01147 415 SMART arm_5 153 194 IPR000225 GO:0005515
Pste2g01147 415 SMART arm_5 318 358 IPR000225 GO:0005515
Pste2g01147 415 PANTHER U BOX DOMAIN-CONTAINING 123 399 - -
Pste2g01147 415 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 164 207 IPR000225 GO:0005515
Pste2g01147 415 Gene3D - 209 404 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01147 Pste-Chr2 12510762 12513818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01147 105 407 U-box Gene Family AT2G23140 47.195 3.06e-77 249
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00803 8 4152394 4154519 Pste2g01147 2 12510762 12513818 PCT