Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01110 ACACGAGCTTCTGCAAAGAGAAAGGCAAATGCTGCATCGGTAGTCATAGTTGAAAAGCAACATCCCAAGAGGCAGCGTGTTGTGTTGGCTGAACTTCCCAATCTACCAAACCTTACTGTTCCCCAAACGCAAAACCCTCTCAAAGAGAAACTCCAATGTCGGAAGAATTCCAATGCAAAGAAACCGTCCCTCACAAACAACACCCCTCTTCCTCCCCAGATCCACCAATCTTATGTTTCGGACATCCACGACTATCTTCGTGCAATGGAGAGAAAGAGAAGACCAACTATTGACTACATTGAAAAAGTTCAGAAAATAGTTACTCCGGTTATGAGAGCAATATTGGTGGATTGGTTAGTAAAAGTAGCTGAGGAGTACAAACTTCTGCCCGATACTCTTCATCTTTCTGTTTCATACATTGATAGATTTTTATCCCTTAATCCCGTGACTAAATCGAGGCTTCAATTGCTGGGTGTTTCGGCAATGCTTATTGCTGGCAAGTATGAGGAAATGGACCCACCTGGTGTGGATGAGTTTTGCAGCATAACAGATAACACTTATGACAAGGCAGAGGTTGTAAAGATGGAGTCTGACATACTCAGATCCCTAAACTTTGAAATGGGAAATCCTACTGTGAACACCTTTCTAAGGAGGTATGCCGATGTTGCTTCAGATAACCAAAAAACACTAAATTTGCAAATTGAATTATTGGGAAGCTATCTTGCTGAGCTAAGTTTGTTGGACTATGATTGTTTAAGATTCTTGCCTTCTGTTGTGGCAGCATCAGCTATATTTCTTGCCAGATTTATTATCTTCCCTGAAGAGCATCCTTGGACTTCTTCCTTGAGTGAATGCTCGGGTTACAAACCAGCCGAGTTGAAAGAATGTGTCCTCATCTTGCATGACTTGTATTTGTTAAGAAAGGCAGCAACCTTCAAAGCTGTTCGAGAGAAATACAAGCAGCCAAAG 969 0.419 TRASAKRKANAASVVIVEKQHPKRQRVVLAELPNLPNLTVPQTQNPLKEKLQCRKNSNAKKPSLTNNTPLPPQIHQSYVSDIHDYLRAMERKRRPTIDYIEKVQKIVTPVMRAILVDWLVKVAEEYKLLPDTLHLSVSYIDRFLSLNPVTKSRLQLLGVSAMLIAGKYEEMDPPGVDEFCSITDNTYDKAEVVKMESDILRSLNFEMGNPTVNTFLRRYADVASDNQKTLNLQIELLGSYLAELSLLDYDCLRFLPSVVAASAIFLARFIIFPEEHPWTSSLSECSGYKPAELKECVLILHDLYLLRKAATFKAVREKYKQPK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01110 323 PANTHER CYCLINS 58 321 IPR039361 -
Pste2g01110 323 CDD CYCLIN_AtCycA-like_rpt2 210 323 - -
Pste2g01110 323 SMART cyclin_7 214 302 IPR013763 -
Pste2g01110 323 SMART cyclin_7 117 201 IPR013763 -
Pste2g01110 323 Gene3D - 95 208 - -
Pste2g01110 323 Pfam Cyclin, N-terminal domain 81 207 IPR006671 -
Pste2g01110 323 Gene3D - 81 323 - -
Pste2g01110 323 SUPERFAMILY Cyclin-like 210 323 IPR036915 -
Pste2g01110 323 ProSitePatterns Cyclins signature. 112 143 IPR006671 -
Pste2g01110 323 PIRSF Cyclin_A_B_D_E 2 323 IPR046965 GO:0016538|GO:0044772
Pste2g01110 323 SMART Cyclin_C_2 210 323 IPR004367 -
Pste2g01110 323 FunFam G2/mitotic-specific cyclin 95 206 - -
Pste2g01110 323 Pfam Cyclin, C-terminal domain 210 323 IPR004367 -
Pste2g01110 323 SUPERFAMILY Cyclin-like 72 207 IPR036915 -
Pste2g01110 323 FunFam Cyclin superfamily protein, putative 207 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01110 Pste-Chr2 12006149 12007683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01110 1 323 Core Cell Cycle Gene Families AT5G43080 55.418 2.81e-122 353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00858 8 4422949 4426443 Pste2g01110 2 12006149 12007683 PCT