Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01080 ACGATATTCATGGTGTTGGCAGTGTCGTGGGCATTGGAGATGTCGATGGGGTGGAATAGGAGCGATGAAGAGGTTAGGAGTATATACGAGGAGTGGCTTAGGAAGCATGAGAAGGTGTATAAGCATAATGTGGTGGTGGAGAAGGAGAAAAGACAACCTCAAGTTTATCGAGGAGCATACAAGGTTGGACTGAACCGATTCGCTGATATTAGCAACGAGGAGTACCGGTCCAGGTACCTGAATACCATGATTGAGTACCCCAGAAGAATACGGGTCAGACCAAGCAACCGTTATGCTTCGCGCGTGGGGGATAACTTGCCGGATTCCGTTGATTGGAGGAAACAAGGTGCTGTTGTCAGAGTCAAAGACCAAGAACAATGTGAGGGTTGTTGGGCATTCTCAGCAATTGCTGCCGTAGAAGGAATTAACAAGATAGTAACAGGCAACCTAACAGCACTGTCAGAGCAAGAATTGTTGGATTGTGACAGAACAGTCAATGCAGGATGTAGTGGCGGGCTTGTAGACTATGCCTTCGAGTACATTATCAACAATGGTGGCATTGACACAGAAGAGGATTACCCCTTTCTAGGTGGTGATGGTATATGTGATAAAAATAAGAAAAATGCTAAAGCTGTTACAATTGATGGTTATGAACGTATACCTGCCTATGATGAATTAGCCTTGAAAAAGGCCGTAGCTCATCAACCAGTGAGCGTTGCCATTGAAGCATATGGCAAAGAGTTTCAGTTATACGAATCAGGAATATTCACAGGAACATGTGGGGCAGCAATAGACCATGGTGTTACAGCAGTTGGTTACGGAACAGAAAATGGAATTGAGTATTGGATTGTCAAGAATTCATTGGGTAAGAAGTGGGGAGAGGAAGATAATACATAG 897 0.4437 TIFMVLAVSWALEMSMGWNRSDEEVRSIYEEWLRKHEKVYKHNVVVEKEKRQPQVYRGAYKVGLNRFADISNEEYRSRYLNTMIEYPRRIRVRPSNRYASRVGDNLPDSVDWRKQGAVVRVKDQEQCEGCWAFSAIAAVEGINKIVTGNLTALSEQELLDCDRTVNAGCSGGLVDYAFEYIINNGGIDTEEDYPFLGGDGICDKNKKNAKAVTIDGYERIPAYDELALKKAVAHQPVSVAIEAYGKEFQLYESGIFTGTCGAAIDHGVTAVGYGTENGIEYWIVKNSLGKKWGEEDNT 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01080 298 CDD Peptidase_C1A 107 295 IPR039417 -
Pste2g01080 298 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 23 295 IPR013128 GO:0008234
Pste2g01080 298 FunFam Cathepsin L1 6 297 - -
Pste2g01080 298 SMART Inhibitor_I29_2 29 75 IPR013201 -
Pste2g01080 298 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 124 135 IPR000169 -
Pste2g01080 298 SMART pept_c1 106 298 IPR000668 GO:0006508|GO:0008234
Pste2g01080 298 SUPERFAMILY Cysteine proteinases 21 295 IPR038765 -
Pste2g01080 298 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 264 274 IPR025660 -
Pste2g01080 298 PRINTS Papain cysteine protease (C1) family signature 281 287 IPR000668 GO:0006508|GO:0008234
Pste2g01080 298 PRINTS Papain cysteine protease (C1) family signature 124 139 IPR000668 GO:0006508|GO:0008234
Pste2g01080 298 PRINTS Papain cysteine protease (C1) family signature 266 276 IPR000668 GO:0006508|GO:0008234
Pste2g01080 298 Gene3D Cysteine proteinases 7 297 - -
Pste2g01080 298 Pfam Papain family cysteine protease 106 295 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01080 Pste-Chr2 11585423 11592015 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01080 2 11585423 11592015 Pste7g01068 7 9801766 9803776 ECH
Pste2g01080 2 11585423 11592015 Pste1g01715 1 5276575 5278691 ECH
Pste2g01080 2 11585423 11592015 Pste2g01080 2 11585423 11592015 ECH
Pste8g00920 8 4788802 4793181 Pste2g01080 2 11585423 11592015 PCT