Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00780 ATAGAGTTCCGAAATCTGACAGAAATAATTAATAAAGCAGCAGAGCAAAGAGGGTCAAGTGTGGAAGTGGAACCTGCTACCAGTAGTAGCACAATGGTCGCTGCTGGTGGAGACCCGCTAGAAGAGCTTAGGAACATGGAAACCATTGCCAATTCAGCTTCCAAGCTACTAACATTGTTTTTCACACTGCTGTTTCTGGGTTCTGAGCTCATACACTGCAATATGTGGGAGGATCTAATTCTGAAGGCCAAACATGGAGGCCTTGATGTCATAGACACTTATGTCTTCTGGGATGTCCACGAACCATCTCCTGGCAATTACAATTTTGAAGGAAGGTATGATCTAGTACGTTTCATTCAGACTGTGCAGAAAGTGGGGCTTTACGCCAATCTTCGGATTGGACCTTATGTTTGCGCTGAGTGGAACTTTGGAGGAATTCCGGTTTGGTTGAAGTATGTTCCTAGCATAAGCTTCAGAACGGATAATGAGCCTTTCAAGGCGGCAATGCAAGGTTTCACGCAGAAAATTGTCCAGATGATGAAGAGTGAGAAGTTGTTCCAATCTCAGGGTGGTCCAATCATTCTCTCTCAGATTGAGAATGAGTACGGACCAGAGAGCAGGGGAGCTGCTGGTCGTGCATATGTAAACTGGGCTGCAAGTATGGCCGTTGGATTGGGGACAGGAGTGCCCTGGGTGATGTGCAAGGAAAACGATGCCCCAGATCCTGTAGTATGTCCTGTCATTCTCTTGCTTTTCACGTTTTGCTTCATTACATTTTTATTGAGGGTTGAACACTTGAACATAAATTCATGTAATGGTTTTTACTGTGATGATTTCTCTCCAAACAAACCATACAAGCCAAGCATGTGGACTGAATCTTGGAGTGGCTGGTTCACAGAATTTGGTGGCCCAATTCACCAGAGACCAATTGAGGATCTATCATTTGCCGTTGCTCGTTTCATACAAAAGGGTGGCTCATATGTGAATTATTACATGTATCATGGGGGAACTAACTTCGGACGATCAGCTGGAGGCCCATTCATAACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGATCAGGCAACCAAAATATAGTCATTTGAAGCAGCTCCATAAGGCTATCAAGCGATGTGAACACGCTTTGGTTTCTTCCGATCCTACGGTTGCCTCATTAGGAACTCTACAACAGGCTCATGTATTCTCTTCGGGGACTGGAGCATGTGCAGCTTTTCTAGCAAACTATAATGCCAAATCTGCTGCCACGGTGACATTCAATAATAGGCAGTATGATTTGCCTCCTTGGTCCATAAGCATCCTCCCTGATTGCAGAACTGCTGTATTTAATACTGCAAAAGTGAGAGTTCAAACTTCAAAGGTGAAAATGCTTCCTGTCAATACTAAGGTGTTCTCATGGGAGAGCTATGATGAAGATATATCTTCACTGGCTGAAAGTTCAAGGATTACAGCTCCTAGACTCTTAGAACAAGTAAACGTTACTAGAGACACCAGTGACTATCTATGGTACATAACTAACATTGACATAAGTCCATCAGAATCCTTTCTTCGAGGAGGACAAAAACCAAGCATTAATGTGCAGTCTGCAGGACATGCTGTTCATGTGTTTGTGAATGGGCAATTTTCAGGGTCGGCTTTCGGGACAAGGGAACAGAGGAGTTGCACATTTAATGGACCTATTGACCTCCAAGCTGGAACAAATAAAATTGCTCTTCTCAGCGTGACTGTTGGATTACCTAATGTTGGTCGGCATTATGAAACATGGGAGACAGGGATCACTGGTCCAGTTTTGCTCCATGGTCTTGAGCAGGGACAGAAAGATTTGACGTGGAATAAGTGGTCATACAAGGTTGGCCTAAGAGGAGAGGATATCAATTTGGTGTCTCCCAATGGGGTCTCGTCTGTTGATTGGGTCAAAGAGTCACTAGCGACTCAAAGCCGGTCTCAATTGAAATGGTACAAGGCTTATTTCGATGCACCAGGGGGAAACGAACCACTGGCTTTGGACCTAGAAAGCATGGGAAAGGGTCAAGTATGGATCAACGGGCAGAGCATAGGGAGATATTGGATGGCTTATGCAAAGGGTGACTGTAATTCTTGCACCTATTCTGGGACCTTCCGCCCTGTAAAGTGCCAACTCGGTTGTGGACAGCCCACTCAACGATGGTATCACGTTCCAAGGTCTTGGCTAAAGCCAACGAAGAACTTGATAGTAGTGTTTGAAGAATTAGGCGGAAATCCTTGGAAAATATCTTTGGTAAAGAGAATGGTACATACACCAGCATTTTAGTGAGAACTAAAGAACCTGAATAAGAATGTGGCGTCTTTATGAATTCTTTGGCTGTCGTTGGGATTGGTTGAAACCAAGGTGTAGCTTTCAAGCAATAAGTTACCTACTTGGCTATAAACCAGCTTCAGTTGGTAGTGTGGCTTGGTTCAACCATTCAGGGTTAAATGTATTCATCGCTAGTTCTATTCTATAGCTTCTTACACCACCCCTCTGTAATTTATAAATGCTTTTCCACATGTCAACGTAGTACTTGTCACTCAAGTTATTGTATTCCCGCATTTTAAAAGGATCGTGGATCCTACCCTTCTCCA 2630 0.4373 IEFRNLTEIINKAAEQRGSSVEVEPATSSSTMVAAGGDPLEELRNMETIANSASKLLTLFFTLLFLGSELIHCNMWEDLILKAKHGGLDVIDTYVFWDVHEPSPGNYNFEGRYDLVRFIQTVQKVGLYANLRIGPYVCAEWNFGGIPVWLKYVPSISFRTDNEPFKAAMQGFTQKIVQMMKSEKLFQSQGGPIILSQIENEYGPESRGAAGRAYVNWAASMAVGLGTGVPWVMCKENDAPDPVVCPVILLLFTFCFITFLLRVEHLNINSCNGFYCDDFSPNKPYKPSMWTESWSGWFTEFGGPIHQRPIEDLSFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYSHLKQLHKAIKRCEHALVSSDPTVASLGTLQQAHVFSSGTGACAAFLANYNAKSAATVTFNNRQYDLPPWSISILPDCRTAVFNTAKVRVQTSKVKMLPVNTKVFSWESYDEDISSLAESSRITAPRLLEQVNVTRDTSDYLWYITNIDISPSESFLRGGQKPSINVQSAGHAVHVFVNGQFSGSAFGTREQRSCTFNGPIDLQAGTNKIALLSVTVGLPNVGRHYETWETGITGPVLLHGLEQGQKDLTWNKWSYKVGLRGEDINLVSPNGVSSVDWVKESLATQSRSQLKWYKAYFDAPGGNEPLALDLESMGKGQVWINGQSIGRYWMAYAKGDCNSCTYSGTFRPVKCQLGCGQPTQRWYHVPRSWLKPTKNLIVVFEELGGNPWKISLVKRMVHTPAF 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00780 772 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 190 202 IPR019801 GO:0004553|GO:0005975
Pste2g00780 772 FunFam Beta-galactosidase 331 459 - -
Pste2g00780 772 FunFam Beta-galactosidase 66 382 - -
Pste2g00780 772 FunFam Beta-galactosidase 630 771 - -
Pste2g00780 772 PRINTS Glycosyl hydrolase family 35 signature 188 203 IPR001944 GO:0004553|GO:0005975
Pste2g00780 772 PRINTS Glycosyl hydrolase family 35 signature 326 341 IPR001944 GO:0004553|GO:0005975
Pste2g00780 772 PRINTS Glycosyl hydrolase family 35 signature 289 304 IPR001944 GO:0004553|GO:0005975
Pste2g00780 772 PRINTS Glycosyl hydrolase family 35 signature 658 672 IPR001944 GO:0004553|GO:0005975
Pste2g00780 772 PRINTS Glycosyl hydrolase family 35 signature 685 701 IPR001944 GO:0004553|GO:0005975
Pste2g00780 772 PRINTS Glycosyl hydrolase family 35 signature 131 150 IPR001944 GO:0004553|GO:0005975
Pste2g00780 772 PRINTS Glycosyl hydrolase family 35 signature 346 362 IPR001944 GO:0004553|GO:0005975
Pste2g00780 772 PRINTS Glycosyl hydrolase family 35 signature 76 94 IPR001944 GO:0004553|GO:0005975
Pste2g00780 772 SUPERFAMILY (Trans)glycosidases 73 383 IPR017853 -
Pste2g00780 772 FunFam Beta-galactosidase 485 622 - -
Pste2g00780 772 Pfam Beta-sandwich domain in beta galactosidase 386 457 IPR041392 -
Pste2g00780 772 Gene3D - 478 624 - -
Pste2g00780 772 Gene3D - 636 770 - -
Pste2g00780 772 SUPERFAMILY Galactose-binding domain-like 620 768 IPR008979 -
Pste2g00780 772 Gene3D Glycosidases 67 382 - -
Pste2g00780 772 SUPERFAMILY Galactose-binding domain-like 441 612 IPR008979 -
Pste2g00780 772 Pfam Glycosyl hydrolases family 35 73 378 IPR031330 -
Pste2g00780 772 PANTHER BETA-GALACTOSIDASE RELATED 74 767 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00780 Pste-Chr2 8274592 8279726 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00780 2 8274592 8279726 Pste2g00780 2 8274592 8279726 ECH
Pste8g01314 8 7000791 7006627 Pste2g00780 2 8274592 8279726 PCT