Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00754 AACATAACAGCCTAAAGTCCTAAACTCGGTTCACTGAAGTGACTTGTCTTGAGCTTATTTAATTTAACCCACTGTCAGCAAATCGGCAGAGACAAGTAATGAAGATCCAGTGCGACGTCTGTAACAAACACAACGCTTCTCTGTTTTGCACCGCCGATGAAGCCGCCCTGTGCGACGCCTGCGACCGCCGCGTCCACCATGCCAACAAACTCGCCTCCAAACACCAACGCTTCTCCCTCAGTCTCCCCTCTGCAAAGCATTTTCCTGTCTGCGACGTCTGCCAGGAGAGAAGAGCCTTTGTGTTCTGTCAGCAAGATAGAGCCATTCTGTGCAAAGACTGTGATGGGTCCATTCATTCTGCCAACGAACTTACCAGGAAGCATAACAGGTTTCTTCTCACTGGGATCAAGTTCTCTGCTACTGCGACGCCTTATTCTTCACCACCCTCACCACCTGTCACAAATATTCAACAACCCACTTTAACAGGTGGTAGCAGCATATCAGAGTACCTCATAAACACTATCCCGGGCATGAAGTTCGAAGATTTCCTCGATTCACATTCCCTTCCCTTGGCTCTCTCCAAGAATGGGGATGGCGTGATGGGCGATGGAAACATGGTTTGGTTCTCGCAGGGGATGTGGGTACCACAAGCGCCGTCTTCTTCTGCTCAAATGTCTGAGACAAGGGAAGGAAGCATTAGATCAAGTGTACATGTTGGGGATGATAATTTCATAGTCCCACAGATGAGTCCTCCCAACAATGTTTCAAAGAGTTCCCGGCTTCTATGGTCAATGTAAAACAGATACAGCTAGCTACAACTCATGTGCCTTTCTCTGTCACTCCCATTTCACCCTCTCCATCTTTTATATTGTTAATTTATTTAGTCTTGTTTGCTTGCTTATTTTTTGTCTACGTCCTTTCTCAACTGCCACCTACTTCCCCTTGGCTTCTCCGTAAATTGGTTTATCGCTTCCATTCTGTAAATACCAACCTTGTGAGATTTTCACTACATGCTAATGTTATCAACACAATTAAAGGTTTCCG 1044 0.4607 MKIQCDVCNKHNASLFCTADEAALCDACDRRVHHANKLASKHQRFSLSLPSAKHFPVCDVCQERRAFVFCQQDRAILCKDCDGSIHSANELTRKHNRFLLTGIKFSATATPYSSPPSPPVTNIQQPTLTGGSSISEYLINTIPGMKFEDFLDSHSLPLALSKNGDGVMGDGNMVWFSQGMWVPQAPSSSAQMSETREGSIRSSVHVGDDNFIVPQMSPPNNVSKSSRLLWSM 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00754 232 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pste2g00754 232 SMART bboxneu5 4 47 IPR000315 GO:0008270
Pste2g00754 232 SMART bboxneu5 53 100 IPR000315 GO:0008270
Pste2g00754 232 Pfam B-box zinc finger 56 96 IPR000315 GO:0008270
Pste2g00754 232 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Pste2g00754 232 CDD Bbox1_BBX-like 5 47 - -
Pste2g00754 232 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Pste2g00754 232 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 219 - -
Pste2g00754 232 CDD Bbox1_BBX-like 57 100 - -
Pste2g00754 232 FunFam B-box zinc finger protein 21 1 98 - -
Pste2g00754 232 MobiDBLite consensus disorder prediction 214 232 - -
Pste2g00754 232 Gene3D Classic Zinc Finger 1 99 - -
Pste2g00754 232 MobiDBLite consensus disorder prediction 210 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00754 Pste-Chr2 7911075 7912302 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Pste2g00754 zf-B_box 4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00754 2 7911075 7912302 Pste1g01611 1 4974752 4977187 ECH
Pste2g00754 2 7911075 7912302 Pste2g00754 2 7911075 7912302 ECH
Pste8g01340 8 7198712 7200145 Pste2g00754 2 7911075 7912302 PCT