Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00340 TTGTAAGCTTTTGGAGTGGCAAAGTTGTAGCTGTTATGGGTGGTAATAGAAATAGAAAAAGCCAGTTCAGAAGAATCCATGCATTTTCTTGTGGGAAAGCTTCTTTTGAAGGGGAGCATTCACTTATTGGGGGTCCTGGATTCTCAAGGATAGTGTATTGCAATGAAGCAGAAGTTGGTGAGGGGAGTCTTGTTAATTATGGTGATAATTATGTGAGTACTACTAAGTATACAGTGGCTACTTTCTTACCCAAATCCTTGTTTGAGCAATTTAGGAGGGTTGCCAATTTTTACTTCCTTATCTGTGCAATTCTGTCTTTTTTCCCGGTTTCTCCTTACTCTTCTGTCAGCAATGTTGTTCCTCTTGTGGTTGTGGTTGCTGTTACAATGGGGAAAGAGGCTGTTGAGGATTGGAAGAGGAAAAAACAGGATATAGATATGAATAACAGAAAGGTTAAAGTACATCATGGAGAAGGTGTTTTTGACTATTCTAAATGGAAAGATTTGAAAGTTGGAGATATAGTAAAGGTTGAGAAGGATGAATTTTTCCCTGCTGATCTCATCTTACTTTCATCAAGCTATGATGATGCAATTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATTTGAAAGTTAAACAAGCACCGGAGGAAACATCAAAGCTGCAAGAAGACTCCAACTATCAAAATTTCAAGGCTATCATCAAATGTGAAGATCCAAATGCAAATTTGTACTCATTTGTAGGCAGTTTTGAGCTTGGAGATCAATTGTATCCTCTTGCACCTCAGCAGCTACTTCTTAGGGATTCAAAGCTAAGGAACACTGAGTTTATCTATGGTGTGGTAATCTTTACAGGCCATGATACAAAGGTTATGCAGAATTCTACAGAACCTCCATCCAAGAGAAGCACAGTTGAGAAACGGATGGATAAGATAATCTACTTTCTGTTCTTTGTCTTGTTTTTACTTTCTTTCATTGGTTCAATTTTCTTTGGGATTGCAACCAGTGAGGACCTTGAAAATGGAGTAATGAAGCGATGGTACCTCAGACCAGATGATACTACAATTTTTTTTGATCCAAAGAAAGCACCAGCTGCAGCAATGCTGCATTTCTTGAGTGCACTTATGTTGTATAGTTACTTGATTCCAATTTCTTTGTACGTTTCCATTGAAATTGTGAAAGTTCTTCAAAGCATCTTCATCAACCAGGACTTGCACATGTATTATGAGGAAACTGACCAGCCAGCACGTGCTCGTACCTCAAATTTGAATGAAGAACTTGGCCAGGTTGATACTATACTTTCAGATAAAACAGGAACTTTGACTTGCAACTCTATGGAATTCATCAAGTGTTCAATTGCTGGGATTGCCTATGGTCAAGGAGTTACAGAAGTTGAGAGAGCTGCAGCCAGGAGAAAAGGAGGAGTACCTATAAGTCAAGAGTTGACAGAAGATGGCGTTCTAGAGTCTCCCATTAAAGGCTTTAACTTTGTTGATGAAAGAATCATGAATGGAAATTGGATCCACCAACCTCACCACAATGTAATCCAGAACTTTCTGTGCTTGTTGGCAGTGTGCCATACTGCAATACCTGAAGTTGATGAAGAAATTGGCAAAGTTTCATACGAAGCTGAGTCACCTGATGAGGCAGCTTTTGTGGTTGCCGCCAGAGAACTTGGCTTTGAGTTTTATGAAAGGACACAGTCGACTATTTCAGTGCGTGAGTTCAATCCCATGTCAGGCATGACAACTGAAAGGTCATACAAACTTTTGAATATATTAGAGTTTAGTAGTACAAGAAAGCGGATTGTCATGTTTGAACGACTAGCAAGAAATGGAAGGGAGTTTGAAGAGAAGACTAAGCAGCACATTGATGAATATGCTGATGCTGGTTTGAGGACCTTGATACTAGCGTATCGAGAACTTGATGAAGAAGAGTACAATCTATTTAATGAAGAATTTATGGAGGCCAAGAACATAGTGAGTGCAGATCGGGAGCAAGTTGTGGAGGAAATATCAGAAAACATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAGCTAGCGCAGGCAGGAATTAAGCTATGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATATTGGGTTTGCTTGTAGTTTACTCAGACAAGGAATGAAGCAAATTATAATTAGTTCAGATACTCCAGAAACCAAATCACTGGAGAAAGTGGAGGACAAGTCTGCTGCTGCAGCAGCAATTAAGGCAAGTGTTATTCATCAATTAAGGAAAGGAAAGGCATTACTTGCTGAATCTGATGAAAACTCTGAGGCATTAGCTCTTATCATTGATGGGAAGTGTCTCACTTATGCACTCGAAGATGATGTAAAGGACTTATTTCTTGAACTTGCTGTAGGCTGTGCTTCTATCATATGCTGTCGTTCATCTCCCAAGCAGAAAGCGCTTGTTACTAGACTAGTAAAGATTAAAACTGGTAGTACAACTCTAGCAATTGGTGATGGAGCAAATGATGTTGGAATGCTTCAAGAAGCAGACATTGGGATTGGTATCAATGGTGTTGAAGGAATGCAGGCCGTTATGTCAAGTGATGTTTCAATTGCCCAATTTCGGTTTCTAGAGCGTTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCAATGATCTGCTACTTCTTTTATAAGAACATTGCCTTTGGCTTGACCCTCTTCTTCTATGAGATTTATGCCTCGTTCTCGGGGACACCTGCATACAATGATTGGTACCTCTCACTATATAACGTATTTTTCACTTCCCTTCCTGTAATTGCCTTGGGAGTGTTTGACCAAGATGTCTCTGCTAGACTATGTCTCAAGTTCCCATTATTATATCAAGAAGGTGTACAAAATGTTCTATTCAGCTGGAAACGGATCCTTGGTTGGGCATTCAATGGAGTCTTGAGTGCCATCATAATATTCTTCTTCTGCATCAACTCAATGGAGAATCAAGCATTTCGTAAATCAGGTGAAGTTGCTGACCTTGAAGTTCTTGGTGCCACCATGTACACTTGCATTGTGTGGGTGGTGAATTCTCAAATGGCACTATCCATCAGTTACTTCACTTACATACAACATTTATTCATATGGGGTGGCATTCTTTTTTGGTATATATTCCTCTTAGTGTATGGAACCATGAACCCCTCTCTATCAACCTCAGCTTATAAAGTCTTGATTGAAGAATGTGCACCTGCACCATCTTACTGGCTCATCACTTTGCTTGTGCTTGTTGCTTCACTACTTCCATATTTTGTCTATGCCTCTATCCAAATGCGGTTCTTCCCCATGTTCCATCAAATGATACAGTGGATTCAAAATGATGGCCAAACATCTGACCCAGAATACGTTAACATTGTGAGACAGAGATCAATAAAGCACACAACAGTTGGGTTCACAGCTCGTTTTGAAGCATCACAAAGTTCTGGAGCATCCAGCACCAAGAGTATTCAACTTTGAAAACAGTTAACAAACACTGTTATTCTGTTTCTTTGTTTTATGTAAAATGACCTGAACAT 3610 0.3953 MGGNRNRKSQFRRIHAFSCGKASFEGEHSLIGGPGFSRIVYCNEAEVGEGSLVNYGDNYVSTTKYTVATFLPKSLFEQFRRVANFYFLICAILSFFPVSPYSSVSNVVPLVVVVAVTMGKEAVEDWKRKKQDIDMNNRKVKVHHGEGVFDYSKWKDLKVGDIVKVEKDEFFPADLILLSSSYDDAICYVETMNLDGETNLKVKQAPEETSKLQEDSNYQNFKAIIKCEDPNANLYSFVGSFELGDQLYPLAPQQLLLRDSKLRNTEFIYGVVIFTGHDTKVMQNSTEPPSKRSTVEKRMDKIIYFLFFVLFLLSFIGSIFFGIATSEDLENGVMKRWYLRPDDTTIFFDPKKAPAAAMLHFLSALMLYSYLIPISLYVSIEIVKVLQSIFINQDLHMYYEETDQPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGIAYGQGVTEVERAAARRKGGVPISQELTEDGVLESPIKGFNFVDERIMNGNWIHQPHHNVIQNFLCLLAVCHTAIPEVDEEIGKVSYEAESPDEAAFVVAARELGFEFYERTQSTISVREFNPMSGMTTERSYKLLNILEFSSTRKRIVMFERLARNGREFEEKTKQHIDEYADAGLRTLILAYRELDEEEYNLFNEEFMEAKNIVSADREQVVEEISENIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPETKSLEKVEDKSAAAAAIKASVIHQLRKGKALLAESDENSEALALIIDGKCLTYALEDDVKDLFLELAVGCASIICCRSSPKQKALVTRLVKIKTGSTTLAIGDGANDVGMLQEADIGIGINGVEGMQAVMSSDVSIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGLTLFFYEIYASFSGTPAYNDWYLSLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSWKRILGWAFNGVLSAIIIFFFCINSMENQAFRKSGEVADLEVLGATMYTCIVWVVNSQMALSISYFTYIQHLFIWGGILFWYIFLLVYGTMNPSLSTSAYKVLIEECAPAPSYWLITLLVLVASLLPYFVYASIQMRFFPMFHQMIQWIQNDGQTSDPEYVNIVRQRSIKHTTVGFTARFEASQSSGASSTKSIQL 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00340 1171 NCBIfam HAD-IC family P-type ATPase 804 920 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g00340 1171 Gene3D - 469 606 IPR023299 GO:0000166
Pste2g00340 1171 Gene3D - 112 286 - -
Pste2g00340 1171 SUPERFAMILY Calcium ATPase, transduction domain A 144 284 IPR008250 -
Pste2g00340 1171 NCBIfam phospholipid-translocating P-type ATPase 55 1122 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pste2g00340 1171 SFLD p-type atpase 408 888 IPR044492 -
Pste2g00340 1171 FunFam Phospholipid-transporting ATPase 673 877 - -
Pste2g00340 1171 PRINTS P-type cation-transporting ATPase superfamily signature 837 856 - -
Pste2g00340 1171 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Pste2g00340 1171 PRINTS P-type cation-transporting ATPase superfamily signature 723 733 - -
Pste2g00340 1171 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1115 IPR023298 -
Pste2g00340 1171 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Pste2g00340 1171 SFLD Haloacid Dehalogenase 408 888 - -
Pste2g00340 1171 CDD P-type_ATPase_APLT_Dnf-like 57 997 - -
Pste2g00340 1171 Pfam Phospholipid-translocating P-type ATPase C-terminal 865 1115 IPR032630 -
Pste2g00340 1171 SUPERFAMILY HAD-like 419 892 IPR036412 -
Pste2g00340 1171 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Pste2g00340 1171 Gene3D - 669 877 IPR023214 -
Pste2g00340 1171 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 24 1128 - -
Pste2g00340 1171 FunFam Phospholipid-transporting ATPase 116 286 - -
Pste2g00340 1171 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 675 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00340 Pste-Chr2 2641869 2648681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00340 10 1161 Primary Pumps ATPases AT1G68710 68.600 0.0 1750
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00340 2 2641869 2648681 Pste2g00340 2 2641869 2648681 ECH