Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00304 ATGCAATCTCAAAGCTCAGATACGTTTCCTTCTCACAATGGCAATGGCCCAATTTCTTATTATGACCCAGCAATATATTATACCAGGCCCTTTTCCATTGACTCTGAAAGCAACCCAACATCAAAACAAGAAAACAATAACAGTGAAATCCTTATTCCTTCTCCACCTCCTCCTTTGTCCTTTTTCCACTTTCCTTCTCCCACTTTTGAAGATACTCAAATTTTCCTTGAACAGCACCACGATTTTCTCCTTCAGTTTCACCACCAACCACTCACTCAAGACTCTGAGCCTCAGCCTCATCATCAACCTGTTAATGTTATCAACATGGAAGAAGAGGGTTCTGTCAAAAAGGGTGTTCAGGGCCCAAGAAAACAAAGTGGCAAAAGAGACAGGCACAGCAAGATCAACACTGCAAGAGGTCTGAGGGATCGAAGAATGAGACTCTCCCTTGATGTTGCAAAGAGGTTTTTTGGCTTGCAAGATATGCTAGGCTTTGACAAAGCTAGCAAGACCGTGGAGTGGTTGTTAAACCAAGCAAAAGTTGAAGTCAATCGTTTGGTAAAAGAGAAGAAGAAGCTGAAGAAGCATGATGATAATAATCATCACCATCATCATCATGATCAGTGTTGTAGCAGTGCTAGCTCCGAATGTGAAGAGGGTGTGTCTAGTCTTGATGAGGTTGTGGTGAGCGGAGATCAAGAACAGCAACTAGAGAGAGTGGACAAAGCTGTGAAGAGAAGGGTCAAGCATTGTAGGAAGATCAGTGCATTCAACCCTCTTGCAAAGGAGTGTAGGGAAAGGGCAAGAGAAAGAGCAAGAGAGAGAACAAGAGAAAAGATGAGAAACCGAGAATCAAAGCAATGTAGAGAGGAAACAATAAATCATCAGGATCTGATCCAGTTGGGTTCTTGGAACCCATTTGAAACAGAAGAATTATCCGGTGCCAAGACCCCCACCGTGCACCCTTCCTTGGACGTGATCACAGAGGCTAAAGAAGAAACCTACCACCCAAAAGACCATGATGATGATTCTTTCATTATTTTCAACAAATGGAGCCCCTCCTTGTTTTTCAATCACTCTGGATTCTATCAAGAAGTAAGTTTCAACTTTCATCAAATGTTGTAG 1125 0.4249 MQSQSSDTFPSHNGNGPISYYDPAIYYTRPFSIDSESNPTSKQENNNSEILIPSPPPPLSFFHFPSPTFEDTQIFLEQHHDFLLQFHHQPLTQDSEPQPHHQPVNVINMEEEGSVKKGVQGPRKQSGKRDRHSKINTARGLRDRRMRLSLDVAKRFFGLQDMLGFDKASKTVEWLLNQAKVEVNRLVKEKKKLKKHDDNNHHHHHHDQCCSSASSECEEGVSSLDEVVVSGDQEQQLERVDKAVKRRVKHCRKISAFNPLAKECRERARERARERTREKMRNRESKQCREETINHQDLIQLGSWNPFETEELSGAKTPTVHPSLDVITEAKEETYHPKDHDDDSFIIFNKWSPSLFFNHSGFYQEVSFNFHQML 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00304 374 MobiDBLite consensus disorder prediction 192 211 - -
Pste2g00304 374 Coils Coil 176 196 - -
Pste2g00304 374 MobiDBLite consensus disorder prediction 110 138 - -
Pste2g00304 374 MobiDBLite consensus disorder prediction 31 50 - -
Pste2g00304 374 ProSiteProfiles TCP domain profile. 128 186 IPR017887 -
Pste2g00304 374 ProSiteProfiles R domain profile. 262 279 IPR017888 -
Pste2g00304 374 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 102 294 IPR005333 GO:0003700
Pste2g00304 374 MobiDBLite consensus disorder prediction 31 54 - -
Pste2g00304 374 MobiDBLite consensus disorder prediction 123 138 - -
Pste2g00304 374 Pfam TCP family transcription factor 127 282 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00304 Pste-Chr2 2225469 2226593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00304 59 300 TCP Transcription Factor Family AT3G18550 38.168 3.85e-30 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste2g00304 TCP 5.4e-44 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00304 2 2225469 2226593 Pste2g00304 2 2225469 2226593 ECH
Pste2g00304 2 2225469 2226593 Pste6g02816 6 15805435 15810745 ECH
Pste2g00304 2 2225469 2226593 Pste5g00470 5 3060632 3062426 ECH