Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00265 ATTAATTAGTTTTTATCCATAACTATACGTGGAAATTAAGATGGTTTCACAAGCTGAACTTAGCATGGATTACAAGCCCTACAGCTACTCCACTCTGCTGAAATCATTTGCAGATCAAACTGATCAAACCTACAAGCTTGAAGAGTTCCTCTCTCGCTTAGAGGAAGAACGTGTCAAGATTGATGCCTTCAAACGCGAGCTTCCTCTCTGCATGCAACTCCTCACCAATGCTGTGGAGGCTTCAAGACTGCAACTACAAGCCTTCAGATTAAACCAAGGCACAAGGCCAGTTCTTGAAGAATTCATACCAATAAAACATTCAAACTCTCAAGAAATCACTGAGAAATCATCAAACATGTCTGACAAGGCGAATTGGATGACATCAGCTCAACTATGGAGCCAATCAAGTGAAGGAACAAAGCCACAATCCACAATTGCATCACAACAAGAAGGTGCTGAAGGTGCCTTTAGCATGAGCCCTAAGCTAGCCCTAGAGAACAAACACAGAAATGGGGGAGCCTTTTTACCATTCTCAAAGGAACGAAACTCGTGCAAAGGATTAAGGGCTCTTCCTGAGTTGGCCCTTTCCTCTTGTGAGAAAGAAATTGAGGAGAAGAAATGTGGAGAGGCAGAGAAATGTTCAAAAAGGGAGAATTCAAGCAAAGGAGGGAGTTGTGAAGATCAGGGAAAAAGTGTTGGAGTTGCATCTGAGGCACAAACAACAAATACTACTACTACCATTACCACAAGTAACTCCAATGGCCAAACTCAGAGAAAAGCTAGAAGGTGTTGGTCACCAGATTTACACCGTCGATTTGTTAATGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCCACTCCAAAACAGATTAGGGAGTTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATCTCCAGAAATATAGGCTTCACACTAGAAGACCTACTCCGAGTCTACAACCCGGAGGACAAGCACCCCAACTTGTAGTACTCGGAGGAATTTGGGTGCCACCAGAATATGCAACAGCTGCAGCAGTAACACATTCTGGTGGCCCCACTCTCTATGGCCCACATCCTACTTCTCATGTGTCACCATCACATTACTGTGCAACCACTCCAATAGTTTCATCATTATCGTTGCCGCCGCCACAACTAGATGATCACTCTTTTCATCATCACCATTTTCACATGTACAAGACAGCACCACAGACCAGAAGCTCACCGGAATCCGATGTTCGGAGTGGCGGCGACCGGTCGGAGAGCATTGAAGATGGGAAGTCGGAGAGTGGTAGCTGGAAAGGAGAGAGTGGAGAGAAAAAAGGGTTGGCAACACTAAGAGATCAAGAAGGGGAAGAGAGCAATGGGAGTGAGATTACTCTTAAATTCTAG 1399 0.446 MVSQAELSMDYKPYSYSTLLKSFADQTDQTYKLEEFLSRLEEERVKIDAFKRELPLCMQLLTNAVEASRLQLQAFRLNQGTRPVLEEFIPIKHSNSQEITEKSSNMSDKANWMTSAQLWSQSSEGTKPQSTIASQQEGAEGAFSMSPKLALENKHRNGGAFLPFSKERNSCKGLRALPELALSSCEKEIEEKKCGEAEKCSKRENSSKGGSCEDQGKSVGVASEAQTTNTTTTITTSNSNGQTQRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPTPSLQPGGQAPQLVVLGGIWVPPEYATAAAVTHSGGPTLYGPHPTSHVSPSHYCATTPIVSSLSLPPPQLDDHSFHHHHFHMYKTAPQTRSSPESDVRSGGDRSESIEDGKSESGSWKGESGEKKGLATLRDQEGEESNGSEITLKF 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00265 452 MobiDBLite consensus disorder prediction 196 248 - -
Pste2g00265 452 MobiDBLite consensus disorder prediction 122 141 - -
Pste2g00265 452 Coils Coil 33 53 - -
Pste2g00265 452 MobiDBLite consensus disorder prediction 122 143 - -
Pste2g00265 452 Gene3D - 245 303 - -
Pste2g00265 452 Pfam Myb-like DNA-binding domain 248 299 IPR001005 -
Pste2g00265 452 SUPERFAMILY Homeodomain-like 243 304 IPR009057 -
Pste2g00265 452 FunFam Myb family transcription factor 245 303 - -
Pste2g00265 452 MobiDBLite consensus disorder prediction 196 210 - -
Pste2g00265 452 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 423 IPR044787 GO:0003700|GO:0006355
Pste2g00265 452 MobiDBLite consensus disorder prediction 401 446 - -
Pste2g00265 452 MobiDBLite consensus disorder prediction 388 452 - -
Pste2g00265 452 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 243 303 IPR017930 -
Pste2g00265 452 MobiDBLite consensus disorder prediction 220 247 - -
Pste2g00265 452 NCBIfam myb-like DNA-binding domain, SHAQKYF class 246 301 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00265 Pste-Chr2 1720694 1723783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00265 1 452 G2-like Transcription Factor Family AT2G03500 49.684 1.43e-120 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste2g00265 Myb_DNA-binding 9.7e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00265 2 1720694 1723783 Pste2g00265 2 1720694 1723783 ECH
Pste6g02850 6 16271942 16274877 Pste2g00265 2 1720694 1723783 PCT