Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04357 CAAAAACCTGTAGCAGCTATGTCTTTTAGCACCAAAACAAAAACAAAAAATAAACCTCTCTTTTCTCAGTCCTAAACTACACATTCACCATATGACCATCATCATTTTCACTCACTACACCAAGTTTTCCATCAAAGAATATCTCAATCTCGCATTCTTCCTATAAAATCTCCACATCCAACTCCAACATCACCCCAAAAGCTTAATTATACATTAACATTCAACACCTTTTCTTTTCATACTTCAAAAAAAATAAACTAGACCCTCTAAAATCCAAGCCTCAAGAGTGTTTGAAGCCTTGTTCCAATGAACATGTTAGGCCTTAGAGACCTAGTTCTCATAGCTCCAACCCCTTCTCCACTTCACCACCACCAACACCAGCACCAACCCATTTCAGCAGAACACCATTCCAACCTCCCTTTGCCTTCTCCAGCATCTCTCAGTGTTGGTCTTGGCATTTTTCCTCTCCTAACTGTGCCACACACCAATGATGTTCATGTTCAGGTTCAAGACTGTGCCAACACCACCACCACCACCAACAACAACAACCACCACCACCCCAACTATTGGAACCTCAAGATGTGTGGTGGAACTGAAGTGAATTCAACTAGAAAAGGTGTCATGAACATGGAGGATGAGGGGAGCAATAAGCATGTGATGGAGAGTGAAGAAAGTGGTGGTGAGTTTAGGGTGTGTCAGGATTGTGGCAATAGGGCCAAGAGAGATTGCAGCTTCAGAAGGTGTAGGACTTGTTGCAAGGGACGCGGCTTTGATTGCAACACTCACGTGAAGAGCACATGGGTCCCTGCATCACTAAGACGTGGTGTTATTGGTGGTGGTGATGGCAATGACAATGGTGATGGAGATTTTGATGGTGGTGCTTCTAAGAGGCTAAGAACTTTGGGGTCGTCAAAGAATGTTGCTGCTACCTCTCATAGTTCCACTTCCAATGCTACCCCAACAAAGAGCTTTAGCTTGGAAACCAGCTCTTGTCAACAAGATGCTGGTTTCAAGCAATCTTTGCCAAGGCATGTGCGTGCACCTGCTGTTTTTAGGTGTCATAGAGTGTCTGCTATTGGGAGTGGTGAAGATGAGATTGCATACATGGCCACGGTTAATATTAGTGGCCATGTGTTTAAGGGGTTTCTGTATGATCATGGTGCTTATGCCAAAAGTGATGTGCCTAGTGTTTCAGAACTGCAATTGGGAAGCAAGGGAAGTGGAAAGAATAATGGAGAATGTTCTCCTGCAATAGGGGTTTCAGCTAGTGTTTACCCTGCATCTGTTTGCTGAGACTGCTTAAAAGATCATGGATCGGTGCTGTGACATTATGAAAGCAGTTCGTTCAGGGAAGACTGACAATATATGCTCTTCTGTTATTATGTAAATCTTCTCTTCTACAGAATGTTTATGTATATTTATACATAGGGGAACCTAGTTTCAATTTCTTGCATCAGAATAGAGACATTATTGATGTTGCGGAACTTTATATTCTG 1496 0.4271 MNMLGLRDLVLIAPTPSPLHHHQHQHQPISAEHHSNLPLPSPASLSVGLGIFPLLTVPHTNDVHVQVQDCANTTTTTNNNNHHHPNYWNLKMCGGTEVNSTRKGVMNMEDEGSNKHVMESEESGGEFRVCQDCGNRAKRDCSFRRCRTCCKGRGFDCNTHVKSTWVPASLRRGVIGGGDGNDNGDGDFDGGASKRLRTLGSSKNVAATSHSSTSNATPTKSFSLETSSCQQDAGFKQSLPRHVRAPAVFRCHRVSAIGSGEDEIAYMATVNISGHVFKGFLYDHGAYAKSDVPSVSELQLGSKGSGKNNGECSPAIGVSASVYPASVC 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04357 328 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 68 310 IPR007818 GO:0003700|GO:0006355
Pste1g04357 328 MobiDBLite consensus disorder prediction 202 221 - -
Pste1g04357 328 MobiDBLite consensus disorder prediction 172 193 - -
Pste1g04357 328 NCBIfam putative zinc finger domain, LRP1 type 129 170 IPR006510 -
Pste1g04357 328 NCBIfam LRP1 C-terminal domain 239 285 IPR006511 -
Pste1g04357 328 Pfam Domain of unknown function (DUF702) 129 286 - -
Pste1g04357 328 MobiDBLite consensus disorder prediction 16 35 - -
Pste1g04357 328 MobiDBLite consensus disorder prediction 20 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04357 Pste-Chr1 29315127 29319777 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pste1g04357 DUF702 7.9e-50 No_clan