Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04349 ATGGCTATGACTGTAGAAGCCCAGTTCCATGTTTTGGCTGTTGATGATAGTCTTATTGACAGAATGTTGATTGAGAGGCTCCTGAAAACTTCTTCCTTTCATGTTACTACTGTGGACTCTGCCACCAAGGCCTTAAAATTTCTTGGTTTGGTTGAAGATGAGTTGAGGACTTTTGACACTCATGTTGCATCAGAAATTCATCAGTTGTTCATGCAAGATATAGATGTAAACTTGATTATAACAGATTACTGCATGCCAGGAATGACTGGCTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCTCTTAAAACCATACCAGTTGTGATCATGTCCTCAGAGAATGTACCATCAAGGATCAACAGATGCTTGGAAGAGGGAGCAGAAAAATTCTTTCTGAAACCAGTTCAACAGGCAGATGTAAACAAGCTCAAGCCACATTTGCTGAAATCAAAAGCTAGTGAAGAGGAAGACCAACCCTTCAATAACAAAAGAAAGGACATGGAAGAAATTCATTCCACAAATAAAACCAGATTAAAATGTAGTAGTTAA 552 0.3804 MAMTVEAQFHVLAVDDSLIDRMLIERLLKTSSFHVTTVDSATKALKFLGLVEDELRTFDTHVASEIHQLFMQDIDVNLIITDYCMPGMTGYDLLRKIKESKSLKTIPVVIMSSENVPSRINRCLEEGAEKFFLKPVQQADVNKLKPHLLKSKASEEEDQPFNNKRKDMEEIHSTNKTRLKCSS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04349 183 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 178 IPR045279 GO:0009736
Pste1g04349 183 Pfam Response regulator receiver domain 11 141 IPR001789 GO:0000160
Pste1g04349 183 SUPERFAMILY CheY-like 9 153 IPR011006 -
Pste1g04349 183 Gene3D - 10 180 - -
Pste1g04349 183 MobiDBLite consensus disorder prediction 147 176 - -
Pste1g04349 183 MobiDBLite consensus disorder prediction 147 183 - -
Pste1g04349 183 CDD REC_typeA_ARR 11 144 - -
Pste1g04349 183 SMART REC_2 9 148 IPR001789 GO:0000160
Pste1g04349 183 ProSiteProfiles Response regulatory domain profile. 10 149 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04349 Pste-Chr1 28974639 28976261 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste1g04349 Response_reg 4.3e-18 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04349 1 28974639 28976261 Pste3g00450 3 2586211 2587351 PCT