Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04304 TCCACATCACAGCTTCAGCACCAAATAGACCCGCCGGAGCTCCACCGCTGCCTCGCTGTCGTACGCCGCCGTTCAGGCGTCGCCGCCGCAGTCACAGTCCAAACGTTGAGCTTCACTTTTCTCACATGCAAAACGCTGTCGTTTTATTTTGTTAATTTTTTCACTCTCACACTTTCACTCACTCACTCTCACACTCTCACTCACTCACTCTCGATGGACTCATCTAGTGATGTATCAGTTGCAAAGCGCCACAGACCTGTTGGATTTTCCCCTGACCTTGATGGACACAAAAGACTGAAATTTTCAAGTGACAGCATGCCATGCCTGGCACATCATAACAATTTAAATGTTGTTGATTACAGCAATCCATTCGCAGTATCTGATGTTCTGAATTGTTTAGAGAATGGAAAATTTGGAAGTGTGACAAACGACATACAAACCCTTATAGCCCTAAAGATGCAAATACTGGGCCCTTACTTCGCTAAATATCCCATACTTGTCAATGAATGGGTAAAAGTGATAAAGAACCGTGATGAAGAAACTTCTAAGTTAGAAAATCAAGAGGTTACTGGTTTGACTCATCAAAATGTCATAGATTTGGAGGGGGAAAACACCAAAAAGGATGTTCCCACAGCAAAAGATACTGTCGTGATTATTGATTCAGATGAGGAAGACAATACAGATAAAAAATCTGTTGTTCCATTTCATGAAGTTGTGTTGCCAAGACCAGTTGCACCATCTCCTGCATTAAAGATGATTGGTTATCATACTCCCATTCCTTACCTGGGAGAAAGCGAAGATCTAAAAATTGAGACAAGTAGGGCTGTTACAGGAGGAAGAAGAAAATCTAAGTCATCTAACAACACTAAGAGCGACAAAGGTGTTTATATTGGTGTACAGGAGGAAGAGGAGGATCAGGTTGATATTGAAGATGATGGTCTAGAAGATATTTGGAAGGAGATGTCAATGGCAATAGAATTTTCCAAAGATGTTTCTGAGGATCCTCTGCCAGATGAAGAGGAAGAAGATGACGATTGTGATCATTCTTTTGTCTTAAAAGATGATCTTGGTTATGTTTGTCGCGTTTGTGGGGTTATTGACCGAAGAATTGAAACCATATTTGAGTTTCAGTACAAGGTTAAACGGAGTACAAGAACTTATGCATCTGATTCATGGAGTACCAAGGGAAAAGCAGATGTATTTGGAATTAATGTTGTCGAAGATGACCTCATAGTAACGGACATTGCAGCACATCCTAGACACATGAAACAGATGAAACCCCATCAAGTTGAAGGATTCAATTTTCTTGTTAGAAATCTTGCGGGTGACCATCCTGGTGGCTGCATCTTAGCCCATGCTCCAGGATCTGGGAAAACGTTTATGATTATCAGTTTCATGCAAAGTTTTCTAGGCAAGTATCCTAATGCAAGACCCTTAGTGGTGCTTCCTAAGGGAATATTGTCAACATGGAAAAAGGAGTTTCTAACTTGGCAAGTGGAGGACATACCTTTATATGACTTTTACACAGTGAAGGCAGACAGTAGAAGTCAGCAACTAGAAGTGTTGAAGCAATGGATGGATCAGAAGAGCATCCTTTTCTTAGGATACAAACAGTTCTCTTCCATTGTCTGTGATAATGGGGCCAACAACACATCTTTATCTTGCCAACAGATCTTACTCAAGGTTCCTTCAATTCTTATTTTAGATGAGGGACATAATCCTAGGAATGAAAACACAGATATGGTACAGTCCCTTGCAAAAGTTCAAACACCTAGAAAAGTTGTACTGTCAGGAACCCTTTATCAAAATCATGTCAGGGAGGTGTTCAACATTTTAAATCTTGTACGGCCAAAATTTTTGAAGATGGAAACTTCAAGGCCAATTGTGAGGCGCATTCATAGTAGGGTTCATATACCAGGGGTGAGAAGCTTTTATGATTTAGTTGAAAACACTTTGCAGAAGGACACAGATTTTAAAAGGAAGGTAGCTGTTATACAAGATTTGCGTGAGATGACCAGCAAGGTACTTCACTATTATAAAGGAGATTTTCTTGATGAGCTTCCTGGTCTTGTTGATTTTACTGTGGTGCTTACTCTTAACCCTAGACAGAAGCCTGAAGTTCAGAAAATAAAGAAGCTATCTAGAAGGAAGTTCAAGATAAGTTCTGTAGGCAGTGCTGTCTATCTTCATCCTAAACTGAAACCACTAGCAGAAAATTGTGGTGAAAATTCAATATCTGATCATGTAATTGATGATTTGATAGAGAAACTGGATATGAGAGATGGTGTGAAGTCAAAATTCTATTACAACATGCTAAATCTTTGTGAATCAGCAGGGGAGAAGCTTCTAGTTTTCAGTCAGTATCTGTTACCTTTGAAATATTTAGAAAGGTTTACTATGAGATGGAAAGGCTGGAGTCACGGAAAAGAAATTTTTGTAATATCAGGAGAATCAACCCCTGAGCAGCGAGAATGGTCCATGGAAAAATTTAACAATTCCCCTGATGCCAAAGTCTTCTTTGGCTCTATCAAGGCATGTGGAGAGGGTATATCATTGGTTGGGGCTTCCCGCATAATTATATTGGATGTTCATCTCAATCCATCAGTCACACGTCAAGCTATAGGTCGTGCATTCAGACCAGGCCAGATGAAGAAGGTGTTTGTGTATCGTTTGGTAGCTGCTGATTCTCCAGAAGAAGAAGATCACTATACTTGTTTCAAGAAGGAATTAATTTCAAAAATGTGGTTTGAATGGAACGAGTATTGTGGTGATCGAGCTTTTGAAGTTGAGGCAGTTGAGGTGAAAGAGTGTGGTGATCTATTTCTTGAAAGTCCACTGTTAGGGGAGGATGTGATCAAGAGAATCAGAGGCAGTTTTACTTGTGCAAGCTTGGAATCCTACCTTTCCTTTATGTCTATATGTCTTGTACCTCTTAGATATGACCGGTTCCCTCTAGCTATTTCTGCTTTAGAAAGTATTTGGATCAGTACAAAGAACTATGTACATACATGTATTTGGCTGATGCTGATTAGTTCGAGGGGTTCATTGGAATATCACACACTGATTGAGTTGGATTCTTGGAATATCACACATGCTGCAAATTTTGAATTGTGTAGATATGGAATTTGA 3129 0.3982 STSQLQHQIDPPELHRCLAVVRRRSGVAAAVTVQTLSFTFLTCKTLSFYFVNFFTLTLSLTHSHTLTHSLSMDSSSDVSVAKRHRPVGFSPDLDGHKRLKFSSDSMPCLAHHNNLNVVDYSNPFAVSDVLNCLENGKFGSVTNDIQTLIALKMQILGPYFAKYPILVNEWVKVIKNRDEETSKLENQEVTGLTHQNVIDLEGENTKKDVPTAKDTVVIIDSDEEDNTDKKSVVPFHEVVLPRPVAPSPALKMIGYHTPIPYLGESEDLKIETSRAVTGGRRKSKSSNNTKSDKGVYIGVQEEEEDQVDIEDDGLEDIWKEMSMAIEFSKDVSEDPLPDEEEEDDDCDHSFVLKDDLGYVCRVCGVIDRRIETIFEFQYKVKRSTRTYASDSWSTKGKADVFGINVVEDDLIVTDIAAHPRHMKQMKPHQVEGFNFLVRNLAGDHPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFLTWQVEDIPLYDFYTVKADSRSQQLEVLKQWMDQKSILFLGYKQFSSIVCDNGANNTSLSCQQILLKVPSILILDEGHNPRNENTDMVQSLAKVQTPRKVVLSGTLYQNHVREVFNILNLVRPKFLKMETSRPIVRRIHSRVHIPGVRSFYDLVENTLQKDTDFKRKVAVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVVLTLNPRQKPEVQKIKKLSRRKFKISSVGSAVYLHPKLKPLAENCGENSISDHVIDDLIEKLDMRDGVKSKFYYNMLNLCESAGEKLLVFSQYLLPLKYLERFTMRWKGWSHGKEIFVISGESTPEQREWSMEKFNNSPDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQMKKVFVYRLVAADSPEEEDHYTCFKKELISKMWFEWNEYCGDRAFEVEAVEVKECGDLFLESPLLGEDVIKRIRGSFTCASLESYLSFMSICLVPLRYDRFPLAISALESIWISTKNYVHTCIWLMLISSRGSLEYHTLIELDSWNITHAANFELCRYGI 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04304 1042 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 439 618 IPR014001 -
Pste1g04304 1042 SMART ultradead3 421 631 IPR014001 -
Pste1g04304 1042 Pfam Helicase conserved C-terminal domain 772 880 IPR001650 -
Pste1g04304 1042 SMART helicmild6 796 881 IPR001650 -
Pste1g04304 1042 Gene3D - 688 944 IPR027417 -
Pste1g04304 1042 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 294 951 IPR044567 GO:0080188
Pste1g04304 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 408 620 IPR027417 -
Pste1g04304 1042 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 749 933 IPR001650 -
Pste1g04304 1042 Gene3D - 398 637 IPR038718 -
Pste1g04304 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 564 919 IPR027417 -
Pste1g04304 1042 Pfam SNF2-related domain 445 654 IPR000330 GO:0005524|GO:0140658
Pste1g04304 1042 CDD SF2_C_SNF 770 892 - -
Pste1g04304 1042 MobiDBLite consensus disorder prediction 273 293 - -
Pste1g04304 1042 MobiDBLite consensus disorder prediction 279 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04304 Pste-Chr1 27943949 27952043 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Pste1g04304 SNF2_N 9.4e-19 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04304 1 27943949 27952043 Pste1g04304 1 27943949 27952043 ECH