Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04300 TTTCATTTTGTGAAACCAGGATTTTCCCCTGGCCCTGACACAGGCAAAAGACAAAAGTTATCAAATGATGTTGACCACAGGAATCCATTTGCAATTACTGAAGTTCTGGATGGTGTAGAGCATGGAAAATATGGAAGTGTCACGAAGGACATAGAGGCCCTTGTAGCCCGAAAAATGCAAATACTTGGATATTACTTTGCAAAGTATCCAAGACTTGTTAATCAGTCATTGAAAACAGACCATGATAAAGAAACTCCTAAGTTCAAAGATCAGAAAGTTATTGGTTTGACACATCAAAATGTCATAGATTTGGAGGAGGAAAACACTGAGAAGGATGTGGATGTTATTGCTCAACCAACAGCACCAGTTCCTGTCGTGATTCACATTGATTCAGATGAGGAAGATAATAAAGATACAAAAATGATTTTTCCATTTCATGAAGCTTTAGATATAGAAGATGATAGAGATGAAAAATCTGTTGTTCCCTTTAAGGAAGCGTCAGATACGGAAGATGATAGAGATAAAAAATCTAGTCCATTTGAAGCTTCAGATACGAAAGATGATGCCGATAAAAAATCTGTTGTTCCATATAAGGAAGTTGTGCAGCCAAGACCAGTTGCATCTTCTCCTGCGTTGAAGACAATTAGGTACCACACTCCTATTCCTTACCAGGGAGAAAGTGAGGATCTAAAAATTGAGACAAGTATGGCTGGTAAAGATAACACTAAGGGAGATAAAGGTGTTTATATTGGTGCACAAGAAGAAGAGAATGGTCAGGTTGATATTGAAGATGAAGATGGTCTAGAAGATATTTGGAAGGAGATGTCAATGGCAATAGAATGTTCCAAAGATGTTTCAGTGAATCCTCTTCCAGATGAAGAAGCAGTAAAAAAGGATGAGGACTGTGATCATACTTTTCTTTTAAAAGATGACCTTGGTTATGTTTGTCGTGTTTGTGGCATTATTGACCAAGGAATTGAAACCATATTTGAGTTCCAGTACAAGGTTAAACGAAGCACAAGGACTTATGCATCATCTGATTCAAGGAATACCAAAGAAAAAGCAGATGCATTTGGAAGTATTGTTGCTAAAGATGATCTCATAGTAAGTGAAGTCTCAGCGCATCCTAGACACATGAAACATATGAAACCCCATCAAGTTGAAGGATTCAATTTTCTTGTTAGAAATCTTGTGGGTGAACATCCTGGGGGCTGCATCTTGGCCCATGCTCCAGGATCAGGGAAAACATTCATGATCATCAGTTTCATGCAGAGTTTTCTAGGAAAGTATCCCAATGCAAGACCCTTAGTGGTGCTTCCTAAGGGAATATTGTCAACATGGAAAAAGGAGTTTCAGATATGGCAAGTGGAAGACTTACCTCTATATGACTTTTACACAGTGAAGGCAGATAGTAGAAGTCAACAGCTAGAGGTGTTGAAGCAATGGGTGGAACAGAAGAGTATCCTTTTCTTAGGATACAAACAGTTTTCCTCTATTGTCTGTGATAATGGGGCCAACAGTGCATCTTTATCTTGCCAACAGATTTTACTCAAGGTTCCTTCAATTCTTATTTTAGATGAGGGACACAATCCCAGGAATGAAAACACAGACATGGTACAGTCCCTTGCAAAAGTTCAAACACCTAGAAAAGTTGTATTGTCAGGAACACTTTATCAAAATCATGTTAGGGAGGTGTTTAATATTTTAAACCTGGTTCGACCAAAATTTTTGAAGATGCAAACATCTAAACCTATTGTCAGGCGCATTCATAGTAGAGTTCATATCCCGGGTGTAAGAAGCTTCTATGATTTAGTTGAAAACACTTTGCAGATGGACACAGATTTTAGAAGGAAAGTGGCTGTCATAAAAGATTTGCGTGAGATGACAAGCAATGTCCTTCACTATTATAAAGGAGATTTTCTTGATGAGCTTCCTGGTCTTGTCGATTTTACAGTGGTACTCAATCTTACAGCTAGACAGAAGCTTGAAATTGAGAAATTGAAAAAGTCATCTATAAAGTTTAAGATATCTTCTGTAGGCAGTGCTATCTACTTGCACCATAAACTGAAACCTTTAGCTGAAAATTGTGGTGAAAATAGTATATCTGATACTATGATTGATGATCTGATAAAGAAAACGGATGTGAGAAATGGTGTGAAGTCCAAATTCTTTTGGAACATGCTAAATTTGTGTGAATCAACTGGGGAGAAACTCCTAGTGTTCAGTCAGTATCTGTTACCTTTGAAATATTTAGAAAGGTTAATCATGAAATGGAAAGGCTGGAGTCTAAGAAGAGAAATCTTTGTAATCTCTGGGGAATCAAGTTCTGAGCAACGAGAGTGGTCAATGGAAAGATTTAACAGTTCTCCTGATGCTAAAGTCTTATTTGGCTCAATCAAGGCTTGTGGAGAGGGCATATCACTGGTTGGGGCATCCCGCATAATTATTTTAGATGTTCATCTTAATCCTTCTGTTACTTGCCAAGCTATAGGTCGTGCTTTTAGGCCTGGCCAGAAGAAGAAAGTCTTTGTGTATAGATTGGTATCTGCTAATTCTCCTGAAGAGGAAGATCACAATATTTGTTTGAGGAAGGAATTAAATTCAAAAATGTGGTTTGAATGGAATGAGTATTGTGGTGATAGAGCTTTTGAAGCTGAGGAAGTTGGGGTAAAAGAGTGTGGTGATCTATTTCTTGAAAGTCCACAGTTAGGGGAGGATGTTAAAACCTTGTATAAAAGGTAGCTTGCTAGGAACATTGGTAAGCAATTATTTTTTGCTATCATGTGATTGCACAATTTTAGTATGGTATTTTGTGTCAGAACAGTGGTGAGTTACTGAACTGAATTGGTTGTCTTTGATCTTACTCTTTGTAAAGATACATGCAATCGATCAGTGTTTTTATTTTGTGATTGCAC 2915 0.3763 FHFVKPGFSPGPDTGKRQKLSNDVDHRNPFAITEVLDGVEHGKYGSVTKDIEALVARKMQILGYYFAKYPRLVNQSLKTDHDKETPKFKDQKVIGLTHQNVIDLEEENTEKDVDVIAQPTAPVPVVIHIDSDEEDNKDTKMIFPFHEALDIEDDRDEKSVVPFKEASDTEDDRDKKSSPFEASDTKDDADKKSVVPYKEVVQPRPVASSPALKTIRYHTPIPYQGESEDLKIETSMAGKDNTKGDKGVYIGAQEEENGQVDIEDEDGLEDIWKEMSMAIECSKDVSVNPLPDEEAVKKDEDCDHTFLLKDDLGYVCRVCGIIDQGIETIFEFQYKVKRSTRTYASSDSRNTKEKADAFGSIVAKDDLIVSEVSAHPRHMKHMKPHQVEGFNFLVRNLVGEHPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQIWQVEDLPLYDFYTVKADSRSQQLEVLKQWVEQKSILFLGYKQFSSIVCDNGANSASLSCQQILLKVPSILILDEGHNPRNENTDMVQSLAKVQTPRKVVLSGTLYQNHVREVFNILNLVRPKFLKMQTSKPIVRRIHSRVHIPGVRSFYDLVENTLQMDTDFRRKVAVIKDLREMTSNVLHYYKGDFLDELPGLVDFTVVLNLTARQKLEIEKLKKSSIKFKISSVGSAIYLHHKLKPLAENCGENSISDTMIDDLIKKTDVRNGVKSKFFWNMLNLCESTGEKLLVFSQYLLPLKYLERLIMKWKGWSLRREIFVISGESSSEQREWSMERFNSSPDAKVLFGSIKACGEGISLVGASRIIILDVHLNPSVTCQAIGRAFRPGQKKKVFVYRLVSANSPEEEDHNICLRKELNSKMWFEWNEYCGDRAFEAEEVGVKECGDLFLESPQLGEDVKTLYKR 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04300 913 SMART ultradead3 378 588 IPR014001 -
Pste1g04300 913 Gene3D - 645 902 IPR027417 -
Pste1g04300 913 SMART helicmild6 749 837 IPR001650 -
Pste1g04300 913 MobiDBLite consensus disorder prediction 1 24 - -
Pste1g04300 913 Pfam Helicase conserved C-terminal domain 731 836 IPR001650 -
Pste1g04300 913 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 874 IPR027417 -
Pste1g04300 913 Gene3D - 349 594 IPR038718 -
Pste1g04300 913 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 365 577 IPR027417 -
Pste1g04300 913 CDD SF2_C_SNF 726 848 - -
Pste1g04300 913 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 22 912 IPR044567 GO:0080188
Pste1g04300 913 MobiDBLite consensus disorder prediction 154 197 - -
Pste1g04300 913 Pfam SNF2-related domain 402 581 IPR000330 GO:0005524|GO:0140658
Pste1g04300 913 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 726 882 IPR001650 -
Pste1g04300 913 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 396 575 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04300 Pste-Chr1 27791238 27797117 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Pste1g04300 SNF2_N 2.2e-19 CL0023