Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g04298 | ATTTTGAATTTCTCTAATTTTCCCGCCTTTGTATTGCAACTTCACTCCCCTGCTACACCTACCCACACACAGCAAAATCCACAAAACACTGATTCTTAATTCTCATCATTCGAATTCAAATTCTCCAACCAAACGCCACCGTTTCGATCTCCGAAACACTGATTCTTGTTATTCGAATCATCGAATTCAAATTCTCCACCGTTTTCACTCTCTCTTCCTCCTTCAAAACCCGCACCACCAAAACGCCGCCGTTTCGTTCCGAAACCCTACCCTTTCTCACCTCACCATGTACATCAAGGAGATTTGCTTGGAAGGGTTCAAATCCTACGCGACCCGCACGGTGGTTCCGGGCTTCGATCCCTTCTTCAACGCCATCACCGGTTTGAACGGTTCCGGCAAATCGAACATTCTCGATTCGATTTGCTTCGTCCTCGGCATCACCAATCTGCAGCAGGTTAGGGCTTCCAACCTTCAGGAACTCGTCTACAAGCAAGGCCAAGCCGGAATCACCAAAGCCACCGTCTCCATCGTCTTCGACAACTCCGATAGGTCGCGAAGCCCTCTCGGTTACGAAGCTCATTCAGAAATCACAGTAACAAGACAGATTGTGGTTGGGGGGAGGAACAAATATTTGATCAATGGGAAGCTTGCACAGCCTAGTCAAGTTCAGAACCTTTTTCATTCAGTGCAGCTAAATGTTAATAATCCACATTTCCTTATAATGCAAGGGCGCATCACTAAGGTTTTGAATATGAAACCGCCAGAGATATTGTCTATGCTTGAGGAAGCTGCGGGGACAAGAATGTACGAGACAAAGAAAGAGGCTGCTCTAAAAACACTTGAGAAGAAGCAGAGTAAGGTTGATGAGATTAACAAGCTTCTTGACCAGGAGATACTACCTGCTCTGGAGAAGTTAAGGAAAGAAAAGACACAATACATGCAATGGGCTAATGGCAATGCCGAGTTAGATAGGCTGAGAAGATTTTGTGTTGCTTATGAGTATGTTCAAGCGGAGAGGATTAAAGACAATGCTGCTTCAGAGGTGGATAAAGTGAAAGCCAAGATGGCAGAGATTGATGACGTTTCTAAGACAAATCAGGTGGAAATAAAGGAAATGGAGACCAAAATAGCTCAGTTGACTGCTGAGAAGGAAGCAAGCATGGGTGGAGAAATGAAATCTCTGTCAGAGAAGGTAGATGCACTTTCCCAGAATCTCGTCAGGGAGACATCTGTACTAAGTAATAAAGAAGACACTTTGAGGAGTGAAGAAGCCAACAAAGCAAATATTGTTAAAAGTATTGAAGAATTGAAGCAATCCGTAGAAGAGAAGGCCTCTGCAGTTAAAAAAGCTGAAGAGGGAGCGGCAGATCTAAAAATTAAAGTAGATGAACTGACAAAGAGTCTTGAGGAGCATGAAAAAGAATACCAGGGTGTTTTAGCTGGCAAAAGCGGTGGTAACGAGGAGAAATGTTTAGAGGATCAACTAAGGGATGCAAAGGTAGCAGTTGGGAGTGCTGAAACAGAATTGAAACAGCTGAAAGCCAAAATTAGTCATTGTGAAAAGGAACTGAAGGAGAAAACCAATCAATTAAAGTCCAAACGTGAAGAAGCTAATGCTGTGGAAAATGAGCTCAATGCTAGACAAAAAGATGTAGAGAATGTTAGAGTACAGTTGGAGTCTCTTTCCTATAAAGAGGGTGAGATGGAAGCTCTTCAAAAGGAGCGTATGACTGAGATGGAGTGTGTGCAAAAGCTGAAGGATGAAATACGCAATCTTTCAGCACACCTGGCAAGTGTTGAATTTACATACCGTGATCCTGTCAAGAACTTTGATAGGTCAAAGGTGAAAGGTGTTGTTGCGAAACTCATCAAAGTAAAGGATAGGTCCACAATGACTGCTCTAGAGGTTACAGCTGGTGGAAAGTTGTATAATGTTGTTGTAGACACAGAAAATACTGGAAAGCAATTACTACAGAATGGTAATCTTAGAAGAAGAGTGACAATTATACCTCTGAACAAAATACAATCCTATACTGTTTCCTCCAGAGTTCAACAAGCTGCTGTTAGATTGGTGGGCAAGGGCAATGCTGAAGTAGCTCTTTCTTTGGTTGGCTATAAAGAAGAATTGAAGAATGCTATGGAATATGTTTTTGGTTCAACATTTGTTTGCAAAACCATTGATGCTGCAAAGGAGGTGTCATTTAATCGAGAGATTCAAACCACAAGTGTCACTCTTGAAGGAGATATATTTCAGCCAAGTGGTCTTTTGACTGGTGGAAGCCGCAAGGGAAGTGGTGATCTTTTGGGACAACTTCATGCTTTGGCTGAAGCTGAGTCAAAACTTTCAGTGCATCAAAGAAGCTTGTCAGAGATTGAGGCAAAGATTTCAAAGCTCCTTCCACTTCAGAAAAAATTTACAGATCTCAAAGCACAATTGGAACTAAAGTCATACGACCTTTCATTGTTTCAGAGCAGAGCTGAGCAAAATGAGCATCATAAGCTTGGAGAATTAGTTAAGAAGATTGAGCAAGAGCTTAATGAAGCAAAATCTACAATCAAGGACAAGCAATTTTTATATGAGGACTGTGTTAAAGCTGTTTCATCTCTTGAGAAATCAATCAAAGATCATGACAATAGCAGAGAGAGTAGGCTAAAAGGCTTGGAGAAAAAGATAAAGTCAATCAAATCTCAAATGCAGTCATCTTTGAAAGATCTGAAGGGACATGATAGTGAAAAGGAGAGACTTGTAATGGAAATGGAAGCTGTTATCCAGGAGCTAGCATCCTTGGAGAATCAATCAGCATCATTGGGAACATTGATCAGTAATCTTGCCTCAGAAGTAGAACAACAGAGATCCACAGTTGTTGCTGCACGGGATAATCTTGATCATGTTCAGTCCCTGCTGAAATCAGTTCGCTTAAAAATGAAAGAATGTGATAAGGAAATCAGTGCTATTATCAAGGAGCAGCAAAAGCTTGAACATAAAATTAGTGAGAGTAATCTTGAAAAGAAGAGGATGGAAAATGAGGTAAAACGAATGGAGATGGAACAGAAAGACTGCTCTGTAAGAGTGGATAAATTAATAGAGAAGCATGCGTGGATTGCTTCTGAAAAACAGTTGTTTGGTAAAAGTGGAACAGATTATGATTTTTCTTCCCGAGATCCTAGTAAGGCAAAGGAACAACTTGACAAGCTTCAGGCTGAGCAGTCTGGGCTTGAGAAAAGGGTGAACAAGAAAGTGATGGCAATGTTTGAGAAGGCAGAAGATGAGTATAATGATTTGATGTCAAAAAAAAATATAATTGAGAATGACAATGACTTTGGATCCATTTTTTCTACGTTACTACCGGGAACAATGGCCAAGTTAGAACCTCCAGAAGGATGCAGCTTCCTTGATGGTCTTGAGGTTCGTGTTGCATTTGGAAGTGTGTGGAAACAGTCATTATCTGAATTAAGTGGAGGTCAGCGATCACTACTTGCACTTTCTCTGATTCTGGCCCTGCTTCTGTTCAAACCTGCTCCACTGTACATCCTTGATGAGGTTGATGCAGCTCTTGATTTGAGCCACACACAAAACATAGGGAGAATGATAAAGGCTCACTTTCCACACTCTCAGTTTATTGTGGTTTCACTGAAGGAAGGCATGTTCAATAATGCAAATGTTCTTTTCCGGACTAAATTTGTGGATGGTGTTTCCACTGTTCAGCGAACGGTTGCAGCTAAACAAAGCAAGTGATATATTTTCTTCATCTTTTAAAAGTCTTACACTTATGTTCTTCTTCAGGGAAAGTAGGAATGTAGGTCATTTCTGTAATTTAAATGCTTATGTAAGTTAAACGTTAGTTAGGGGTTCATATGTGATTGTATTTTTTCTGTAAAGTATTTAAAAGTTATAACTTAGAAGGTAGCACTAATGTAATGCAACTCATGAAAATTGCTTCTGATGTAACTACTCATATTACACTAACGAGGATGGGATAACATATGGATGTGTTTGAATCTGGC | 4005 | 0.406 | MYIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIVFDNSDRSRSPLGYEAHSEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQSKVDEINKLLDQEILPALEKLRKEKTQYMQWANGNAELDRLRRFCVAYEYVQAERIKDNAASEVDKVKAKMAEIDDVSKTNQVEIKEMETKIAQLTAEKEASMGGEMKSLSEKVDALSQNLVRETSVLSNKEDTLRSEEANKANIVKSIEELKQSVEEKASAVKKAEEGAADLKIKVDELTKSLEEHEKEYQGVLAGKSGGNEEKCLEDQLRDAKVAVGSAETELKQLKAKISHCEKELKEKTNQLKSKREEANAVENELNARQKDVENVRVQLESLSYKEGEMEALQKERMTEMECVQKLKDEIRNLSAHLASVEFTYRDPVKNFDRSKVKGVVAKLIKVKDRSTMTALEVTAGGKLYNVVVDTENTGKQLLQNGNLRRRVTIIPLNKIQSYTVSSRVQQAAVRLVGKGNAEVALSLVGYKEELKNAMEYVFGSTFVCKTIDAAKEVSFNREIQTTSVTLEGDIFQPSGLLTGGSRKGSGDLLGQLHALAEAESKLSVHQRSLSEIEAKISKLLPLQKKFTDLKAQLELKSYDLSLFQSRAEQNEHHKLGELVKKIEQELNEAKSTIKDKQFLYEDCVKAVSSLEKSIKDHDNSRESRLKGLEKKIKSIKSQMQSSLKDLKGHDSEKERLVMEMEAVIQELASLENQSASLGTLISNLASEVEQQRSTVVAARDNLDHVQSLLKSVRLKMKECDKEISAIIKEQQKLEHKISESNLEKKRMENEVKRMEMEQKDCSVRVDKLIEKHAWIASEKQLFGKSGTDYDFSSRDPSKAKEQLDKLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDNDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQSK | 1149 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g04298 | 1149 | Coils | Coil | 736 | 763 | - | - | |
| Pste1g04298 | 1149 | Coils | Coil | 817 | 837 | - | - | |
| Pste1g04298 | 1149 | Coils | Coil | 178 | 198 | - | - | |
| Pste1g04298 | 1149 | Gene3D | - | 577 | 667 | - | - | |
| Pste1g04298 | 1149 | Coils | Coil | 324 | 379 | - | - | |
| Pste1g04298 | 1149 | PIRSF | SMC | 1005 | 1128 | IPR024704 | GO:0005524|GO:0016887 | |
| Pste1g04298 | 1149 | PIRSF | SMC | 1 | 1011 | IPR024704 | GO:0005524|GO:0016887 | |
| Pste1g04298 | 1149 | Coils | Coil | 239 | 259 | - | - | |
| Pste1g04298 | 1149 | CDD | ABC_SMC2_euk | 1 | 156 | IPR027120 | GO:0005524|GO:0016887 | |
| Pste1g04298 | 1149 | FunFam | Structural maintenance of chromosomes 2 | 518 | 583 | - | - | |
| Pste1g04298 | 1149 | Pfam | RecF/RecN/SMC N terminal domain | 2 | 428 | IPR003395 | - | |
| Pste1g04298 | 1149 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 1130 | IPR027417 | - | |
| Pste1g04298 | 1149 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 | 1 | 1010 | - | - | |
| Pste1g04298 | 1149 | SUPERFAMILY | Smc hinge domain | 483 | 686 | IPR036277 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
| Pste1g04298 | 1149 | SUPERFAMILY | Tropomyosin | 299 | 482 | - | - | |
| Pste1g04298 | 1149 | Coils | Coil | 789 | 809 | - | - | |
| Pste1g04298 | 1149 | Coils | Coil | 267 | 287 | - | - | |
| Pste1g04298 | 1149 | Gene3D | - | 995 | 1149 | IPR027417 | - | |
| Pste1g04298 | 1149 | FunFam | Structural maintenance of chromosomes 2 | 1 | 202 | - | - | |
| Pste1g04298 | 1149 | Coils | Coil | 982 | 1009 | - | - | |
| Pste1g04298 | 1149 | Coils | Coil | 473 | 507 | - | - | |
| Pste1g04298 | 1149 | Gene3D | - | 517 | 677 | - | - | |
| Pste1g04298 | 1149 | Coils | Coil | 880 | 928 | - | - | |
| Pste1g04298 | 1149 | Coils | Coil | 400 | 462 | - | - | |
| Pste1g04298 | 1149 | Gene3D | - | 1 | 202 | IPR027417 | - | |
| Pste1g04298 | 1149 | Pfam | RecF/RecN/SMC N terminal domain | 838 | 1134 | IPR003395 | - | |
| Pste1g04298 | 1149 | Coils | Coil | 679 | 699 | - | - | |
| Pste1g04298 | 1149 | SMART | SMC_hinge_2 | 518 | 638 | IPR010935 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
| Pste1g04298 | 1149 | Pfam | SMC proteins Flexible Hinge Domain | 518 | 637 | IPR010935 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste1g04298 | Pste-Chr1 | 27762938 | 27773884 | Dispersed |