Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04283 ATGAAAACGCTATCGGTCAATACTGAAGATTCTTTTTCCAGTTTGCTGGAACTTGCTTCTAACAATGATACTGAAGGCTTGAAGGTGCTTTTAGAGAAGGATTCTTCTTCGATCAATGAGGTTGGGGTCTGGTATGGTCGACAAAACGGATCAAAGCAGATTGTTCTTGAGCATAAAACCCCTTTGATGGTTGCTGCTACTTATGGTAGCATAGATGTTATGAAGCTTATTTTGATGTACCCTGAGGCTGATGTGAATTTTGCGTGTGGGGCGAATAAAACCACTGCCCTTCACTGTGCTGCTTCTGGTGGGTCTGCTAATGCTGCTGAAGCTGTGAAGCTTCTGTTATCTGCTGGTGCTGATGTCAATTGCGTGGATGCCAATGGGAATCGCCCTGTTGATGTAATTGTTGCTCCTCACAAGCTGCAAGATGTGAAAGCGATTCTTGAGGAACTCCTTTCAGACAGTTCTTCTGATGGGTCTGTTGGTGAATTCTCTGTTCCAGTGTCTGTTAATTCTTCCAGTCCTGGTTCTCCTGCAAATGAGATGCCGTATACTCCTTCTGCTTCACCACCATCTCCTGTGGCTGCAAAGTTTACTGATGCAGCTATTGGCTCTTTGTCAGAGAAGAAGGAGTATCCCATTGATCCGTCCCTGCCTGATATAAAGAACAGCATATATGCAACTGATGAGTTTAGGATGTTTTCGTTCAAGGTGAGGCCTTGTTCCCGGGCATACTCTCATGATTGGACTGAGTGCCCTTTTGTCCATCCTGGAGAGAATGCTCGGAGGAGAGATCCCAGGAAGTTTCATTACAGCTGCGTGCCTTGCCCTGATTTTAGAAAAGGGGCTTGTAGGCGCGGAGACATGTGTGAATATGCTCATGGGGTGTTTGAGTGCTGGCTGCACCCAGCTCAGTATCGCACTCGTCTTTGCAAAGATGGTACCAGTTGCAATAGAAGGGTGTGTTTCTTTGCTCACACTGCAGAGGAGCTGCGTCCCTTGTATGTGTCCACTGGATCTGCTGTCCCTTCTCCCCGATCATCTGCCTCGGCTCCTAACGTGATGGACATGGCAGCAGCAATGAGCCTTTTGCCAGGCTCACCGTCATCAGTCTCTTCTATGTCGCCATCCCACTTTGGCCAACCAATGTCCCCATCTGCTAATGGCATGTCACTCTCATCTGCTGCTTGGGCTCAGCCAAATGTACCAGCTCTTCATTTACCAGGAAGCAATCTTCAATCTAGCCGATTGAGGTCTTCCCTTAATGCGCGTGACATTCCACCAGAGGATTTGAACGCAATGTGTGATTTTGATGGCCAGCAGCACCGTTTGAATGACTTGAGCTGTTACTTACAGCCTCGCCCTGGTGCTGGTTCTGTGAGTAGATCTGGGCGGTCCAAGACCTTAACTCCTTCAAATCTGGAGGAGCTCTTCTCTGCTGAGATTTCCTCATCTCCGCGGTATTCTGATCCAGCAGCTGGTTCTGTGTTTTCGCCTACCCACAAATCAGCTGTTCTCAACCAGTTTCAACAGCTCCAAAGTATGTTGTCACCAATAAACACTAATTTGTTATCTCCTAAGAATGTTGAGCATCCTCTTTTACAGGCTTCCTTTGGTGTCTCTCCTTCTGGAAGGATGTCACCAAGAAGTGTTGAACCAATCTCTCCAATGAGTACTCGCATGTCCTCATTTGCTCAGCGTGAGAAACAGCAGCAACAGCTACGCAGTGTCAGTTCAAGGGACCTTGGCGCCAACAGTCCTGCCTCAATTGTTGGGTCCCCTGTAAACCCTTGGTCAAAGTGGGGATCTCCCAATGGGAAAGCTGATTGGTCAGTAAATGGAGATGAGTTTGGTCGGCAGATGCGAAGATCATCATCGTTCGAGCTCAAGAACAATGGGGAAGAGCCTGATCTATCTTGGGTCCAATCTCTAGTGAAGGAATCTCCACCTGAGATGATCAAAGAGAAGTTTTCATCTCCTGTGCCTACTGCATCTGCTGATGGACTGAATTCCAATTCTCAAATTGAACCTATTGATCATTCTGTTTTAGGAGCCTGGCTTGAGCAAATGCAACTGGATCAGCTTGTAGTCTAG 2097 0.4735 MKTLSVNTEDSFSSLLELASNNDTEGLKVLLEKDSSSINEVGVWYGRQNGSKQIVLEHKTPLMVAATYGSIDVMKLILMYPEADVNFACGANKTTALHCAASGGSANAAEAVKLLLSAGADVNCVDANGNRPVDVIVAPHKLQDVKAILEELLSDSSSDGSVGEFSVPVSVNSSSPGSPANEMPYTPSASPPSPVAAKFTDAAIGSLSEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTAEELRPLYVSTGSAVPSPRSSASAPNVMDMAAAMSLLPGSPSSVSSMSPSHFGQPMSPSANGMSLSSAAWAQPNVPALHLPGSNLQSSRLRSSLNARDIPPEDLNAMCDFDGQQHRLNDLSCYLQPRPGAGSVSRSGRSKTLTPSNLEELFSAEISSSPRYSDPAAGSVFSPTHKSAVLNQFQQLQSMLSPINTNLLSPKNVEHPLLQASFGVSPSGRMSPRSVEPISPMSTRMSSFAQREKQQQQLRSVSSRDLGANSPASIVGSPVNPWSKWGSPNGKADWSVNGDEFGRQMRRSSSFELKNNGEEPDLSWVQSLVKESPPEMIKEKFSSPVPTASADGLNSNSQIEPIDHSVLGAWLEQMQLDQLVV 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04283 698 PRINTS Ankyrin repeat signature 111 125 IPR002110 GO:0005515
Pste1g04283 698 PRINTS Ankyrin repeat signature 58 73 IPR002110 GO:0005515
Pste1g04283 698 MobiDBLite consensus disorder prediction 566 601 - -
Pste1g04283 698 Gene3D - 3 160 IPR036770 -
Pste1g04283 698 ProSiteProfiles Ankyrin repeat profile. 92 127 IPR002110 GO:0005515
Pste1g04283 698 MobiDBLite consensus disorder prediction 156 184 - -
Pste1g04283 698 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 276 296 IPR000571 GO:0046872
Pste1g04283 698 SUPERFAMILY Ankyrin repeat 5 150 IPR036770 -
Pste1g04283 698 Gene3D - 271 334 - -
Pste1g04283 698 Pfam Ankyrin repeats (3 copies) 19 126 IPR002110 GO:0005515
Pste1g04283 698 PANTHER UNKEMPT FAMILY MEMBER 17 649 IPR045234 -
Pste1g04283 698 MobiDBLite consensus disorder prediction 156 192 - -
Pste1g04283 698 SMART ANK_2a 92 124 IPR002110 GO:0005515
Pste1g04283 698 SMART ANK_2a 57 87 IPR002110 GO:0005515
Pste1g04283 698 SMART ANK_2a 10 40 IPR002110 GO:0005515
Pste1g04283 698 ProSiteProfiles Ankyrin repeat region circular profile. 92 126 - -
Pste1g04283 698 ProSiteProfiles Zinc finger C3H1-type profile. 276 298 IPR000571 GO:0046872
Pste1g04283 698 SMART c3hfinal6 271 297 IPR000571 GO:0046872
Pste1g04283 698 SMART c3hfinal6 306 329 IPR000571 GO:0046872
Pste1g04283 698 FunFam Zinc finger CCCH domain-containing protein 66 229 297 - -
Pste1g04283 698 MobiDBLite consensus disorder prediction 566 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04283 Pste-Chr1 27519286 27521382 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste1g04283 Ank_2 6.7e-11 CL0465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04283 1 27519286 27521382 Pste1g04283 1 27519286 27521382 ECH