Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04279 CTTGTGTGTGAGATTCACAATCCAATGGACCAGAATGACAGTTCCAACAAGAAGTGGAAGCTACCCCTCTTCATTTTCTTCAAAGATGCAAGGCATGTTTTCAAGCTGGATGCTCTTTCTCGTGAGATATTAGGAATTGCATTCCCCTCTGCATTGGCTGTTGCTGCTGATCCTATTGCTTCTCTCATAGACACAGCATTCATAGGCCACTTAGGACCGGTGGAACTTGCTGCAGCAGGTGTTTCCATTGCCTTGTTCAACCAAGCTTCAAGGATTACCATATTCCCTCTGGTCAGCATTACCACTTCCTTTGTAGCTGAGGAAGATACTATTGAAAACCTGAAAGCAGCAGAAAATGGTAGTAATAAGGCTAAGTGCAGTGAAGCAATTGTGCCAGAGGATCATATGCTTCAAGACATAGAGAAAGGTACCCTCAAAGAGAACAATAAATCTGCAGCAGAAACTATGAAGGAAAAAGATGAACCAAAGGATCTTTTAGTGAAAAATTTAGTACCTCAAGATGTGGGAAATAATGCTGCTGATAACAATGACACAAAAATTAGAGATGAGGCCAATACAAATATATGCAAATCTTCATGGGTTACTAGTAGCAATAAGAGTAAGGACAAAGGTGGAAAGAAGAAACGAATTGCTTCAGCATCAACAGCACTTCTTTTTGGCACAATCCTTGGTCTCATTCAAGCTGCAGTTCTTATATTTGCAGCCAAACCTCTCTTAGGTGTTATGGGTGTGAAACGAGACTCTCCTATGCTAAATCCAGCAGAGAAGTACTTAAAATTGAGATCATTTGGGGCACCTGCAGTTCTTCTCTCCTTGGCCATGCAAGGAATATTCCGAGGGTTCAAAGATACAATAACTCCTTTACATGTCATAGGTTGGTTCAAATTATCCACCATATTTTCAAAATCTTCAGGATATGCTTTGAATGTCATATTGGACCCAATACTTATTTTTAGATTGAAATTAGGCATCAGAGGTGCAGCCATTGCACATGTTCTCTCCCAGTATATGATGGCCTTCACCCTCCTATTTATATTAATGAAAAAAGTGCATCTCCTACCTCCAAGCATAAAGGATTTGCAGATTTTTCGGTTTCTTAAAAATGGAGGATTGTTGATGCTAAAGGTAGTGTCAGTGACATTTTGTGTGACCTTAGCAGCATCATTAGCAGCAAGACTAGGTTCAATTCCAATGGCTGCATTTCAAACATGCCTACAGGTCTGGTTTACATCATCCCTCCTTGCAGATGGTTTAGCTGTTGCTGTTCAGGCAATTCTAGCTTGTTCTTTTACTGAGAAAGACCATAACAAAACAACAGCTGCTGCAGCAAGGACACTGCAAATGAGTTTTGTTTTAGGAGTAGGGCTTTCTGTTGCTGTTGGACTTGGATTATACTTTGGAGCTGGAATATTTTCCAAAAATGTTCATGTTCTACACTTAATTAAATTAGGCATCCCGGTTCTGGTGTCACTAGTAAGTGTAGCCACAGAATTTGTTCTCTACAGGACCAAACATTTCGTTGGAATTTGGGTTGCACTTACCATTTATATGACTCTTCGCATGTTGGCTGGTGTATGGAGGTAA 1605 0.4031 LVCEIHNPMDQNDSSNKKWKLPLFIFFKDARHVFKLDALSREILGIAFPSALAVAADPIASLIDTAFIGHLGPVELAAAGVSIALFNQASRITIFPLVSITTSFVAEEDTIENLKAAENGSNKAKCSEAIVPEDHMLQDIEKGTLKENNKSAAETMKEKDEPKDLLVKNLVPQDVGNNAADNNDTKIRDEANTNICKSSWVTSSNKSKDKGGKKKRIASASTALLFGTILGLIQAAVLIFAAKPLLGVMGVKRDSPMLNPAEKYLKLRSFGAPAVLLSLAMQGIFRGFKDTITPLHVIGWFKLSTIFSKSSGYALNVILDPILIFRLKLGIRGAAIAHVLSQYMMAFTLLFILMKKVHLLPPSIKDLQIFRFLKNGGLLMLKVVSVTFCVTLAASLAARLGSIPMAAFQTCLQVWFTSSLLADGLAVAVQAILACSFTEKDHNKTTAAAARTLQMSFVLGVGLSVAVGLGLYFGAGIFSKNVHVLHLIKLGIPVLVSLVSVATEFVLYRTKHFVGIWVALTIYMTLRMLAGVWR 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04279 534 NCBIfam MATE family efflux transporter 49 507 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pste1g04279 534 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 11 534 IPR044644 -
Pste1g04279 534 Pfam MatE 219 298 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04279 Pste-Chr1 27450117 27456780 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03385 3 26636465 26642237 Pste1g04279 1 27450117 27456780 ECH
Pste1g04279 1 27450117 27456780 Pste1g04279 1 27450117 27456780 ECH