Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04247 ATGAAACTGGTTGTGGAGGTTATTAATGCTCATGATCTTATGCCCAAAGATGGTGAGGGATCAGCCAGTCCCTTTGTGGAAGTAGACTTTGAAAATCAGATGAGCCGAACCAGAACTGTCCCAAAGAACCTCAACCCCACTTGGAACCAAAAACTAGTTTTCAACTTAGATGCAACCAAACCTTACCATCGCCAAACGATTGAAGTGTCAGTCTACAACGAGAGAAGACTTAATCCAGGTAGAAACTTCCTTGGAAGGGTGAGAATTCCTTGCTCCAATATTGTCAAGGAAGGTGAGGAAGTGTACCAGATTTTCCCACTTGAAAAGAAGTGGTTTCTCTCACCTGTTAAGGGTGAGATTGGCCTAAAAATATACATTGCATCAGAATCCAACTCCAAACCAAAACCTCTTTCTCCTGTTTTCCTTTCAGAACAAGAAAAACTCCCACCATCCATTCCACCCCAAGAACAAGAATCCACTACTAGTAACCTTCTTCCCCCTCAAAGTATCCCCTCAGGCCTAACTGACACAACATTAGAAGCTGGTCCATGTGAAGAACTTCCTGCATTTGAAACCCCAAAAGCAAGCACAGTAGAAGCAGAAGTAGAATCTGTTGCAGTGCCAGATTACTCAGCTGCCGAAACTCGGTCTAGCAGCATTGATATTGATCAAGAGCCAAAGAAAGAAAGCAGAGAACCTGTCCTAGAGATAATCCAACAACTAGATAAGCACCAAGTTCTCCAGCCACAAATTATTTCAATAAAGAGAAGACCACAAGGTACTCCATCCACCATGCACTCAGTTGATCCTCAAGTCCAATCTAGCCATCATGAAAACTATAATCACAATGACACCAATCAACAGCCAAGGATCTCAATAAAGAGGCGACCGCAAGCACAAGGTACTCCATTCACAGTGCATTCAGCTGATCATCATCCACAAGTCCACCAAAGCTACAATCAAAATGACACCAACCTGCAGCCAAGGATTTCAATTAAGAGAAGACCACAAGGACCAGGTACTCCATCACCAATGCGCTCTTTCAATCCACAAGTCCGTGCTAACCATGATGAAACCTTCAACCTCACGGGAAACAACCCGCAACAGCCAAGAATTTTGGTAGAGAGACAACCACAGAATACTCCACTGACCACACACCGAGTAAGTCCCCAAGTCCCTACTAGAAATAATGAAAACTACAATTTCAGTGATGCTGACACCAATTCACAACTTGGTGAGAGGTGGCCTAGTGATGGAGCTTATGGTAGAAGAGGGTGGGTGAGTGGTAGTGACAGATTGAGCAGCACATATGACCTTGTTGAGCAGATGTTTTATCTGTATGTTCGTGTTGTGAAGGCGAAAAATCTTCCCCCAAGCACCATCACCTCAAGATGTGATCCTTATGTGGAAGTGAAGCTGGGGAACTATAAGGGAAGAACAAAGCACTTTGATAGGAAATTGAACCCAGAGTGGAACCAAGTGTTTGCTTTCTCCAAAGACCGAATTCAATCTTCTGTTTTAGAAGTCTTTGTGAAAGATAAGGCAATGCTGGGCAGAGATGACTATCTTGGAAGGGTGGTTTTTGACCTCAATGAGGTTCCAACAAGAGTTCCACCAGATAGTCCACTAGCTCCTCAGTGGTACCGGCTCGAGGACTGGCGCGAAGAAGGCAAGGTGAGGGGTGACATTATGCTTGCAGTTTGGATGGGAACACAAGCTGATGAGGCTTTCACAGATGCTTGGCATTCTGATGCTGCCACTGTCTATGGGGAGGGTGTTTTCAACATCAGATCAAAGGTTTACATGTCACCAAAACTGTGGTATCTCAGAGTGAATGTAATAGAAGCTCAAGATGTGATACCAAGTGACAGAAACCGCCTGCCAGAGGTTTTTGTGAAAGCTCAAGTAGGTTGCCAAGTGCTGACAACCAAGATATGCCCCACTAGAACAACCAACCCATTCTGGAATGAAGATTTGGTTTTTGTAGCATCTGAGCCATTTGAAGAGCATTTAACAATCACTGTGGAGGATCGCCTGCACCCTTCAAAAGATGAGGTACTTGGGAAGATAAGCTTACCAATGACACTCTTTGAGAAGCGGCTGGACCACAGGCCGGTTCATTCTCGCTGGTTCAATCTTGAGAAATTTGGTTTTGGAATGATAGAAGGTGATAGAAGAAATGAGCTTAAGTTTTCAAGCAGGATTCACATGAGAGTTTGCCTTGAAGGTGGATATCATGTCCTAGATGAGTCCACATTGTACACTAGTGATCAAAGACCAACAGCAAGACAGCTATGGAAGCAACCTATTGGGATTCTTGAAGTAGGCATCTTAGGAGCACAAGGGCTTCTCCCAATGAAGATGAGGGATGGAAGAGGCAGCACAGATGCATATTGTGTTGCCAAGTATGGTCAGAAATGGGTCAGAACTAGAACATTTTTGGACACTTTCAGTCCTAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGTACTGTGATAACATTGGGAGTTTTTGACAATTGCCATTTAGGTGGAGGGGAAAAAGAAAAAGCTCCTGGTGGCACTACTGCTCGAGATTCGCGGATTGGAAAGGTAAGGATACGGCTATCAACACTTGAGGCTAATAGAATTTACACCAATTCTCACCCTCTTCTTGTTCTACACCCACATGGAGTTAAGAAGATGGGGGAGCTTCAGTTAGCAGTGAGGTTCACTGCACTCTCACTTGCTAACATAGTTCATATATACGGCCAACCCTTGCTTCCCAAGATGCATTACTTACACCCTTTCACAGTTAATCAAATAGACAACTTAAGGTACCAAGCAATGAACATTGTAGCAGCAAGGCTAGGCCGAGCTGAACCACCCCTAAGGAAGGAAGTTGTGGAGTACATGTTGGATGTTGATTCCCATATGTGGAGCATGAGAAGGAGCAAAGCTAATTTCTTTCGCATCATGTCCCTTTTCTCTGGTTTGATCACAATGGGAAAGTGGTTCAGTGATGTTTGCCTTTGGAAGAACCATGTTACATCAGTCCTAGTTCACATTCTTTTTCTAATACTGATATGGTACCCAGAATTGATCCTACCAACTGTGTTTCTCTACATGTTCTTGATTGGTCTGTGGAACTACAGGTTCAGGCCTAGGCACCCTCCTCACATGGATACTAAACTCTCATGGGCTGAAGCTGTTCACCCTGACGAACTCGATGAAGAATTCGACACGTTTCCAACTTCAAGATCACAAGATGTTGTGAGAATGAGGTATGACAGGATTAGAACTGTGGCAGGTAGGATTCAGACAGTTGTTGGGGACATAGCTACACAAGGGGAGAGGTTTCAGTCTCTACTGAGCTGGAGAGACCCCAGAGCAACCAGCCTCTTTGTTGTGTTTAGCTTTTGTGCTGCTGTGGTTCTCTATGCAACACCATTCAGAGTGGTGGCTCTGGTTACTGGTTTGTACTCTTTGAGACATCCAAAGTTTAGGAGCAAGCTGCCTTCTGTTCCAAGTAATTTCTTCAAGAGGCTCCCAGCTAGAACAGATAGTTTACTGTGA 3564 0.4422 MKLVVEVINAHDLMPKDGEGSASPFVEVDFENQMSRTRTVPKNLNPTWNQKLVFNLDATKPYHRQTIEVSVYNERRLNPGRNFLGRVRIPCSNIVKEGEEVYQIFPLEKKWFLSPVKGEIGLKIYIASESNSKPKPLSPVFLSEQEKLPPSIPPQEQESTTSNLLPPQSIPSGLTDTTLEAGPCEELPAFETPKASTVEAEVESVAVPDYSAAETRSSSIDIDQEPKKESREPVLEIIQQLDKHQVLQPQIISIKRRPQGTPSTMHSVDPQVQSSHHENYNHNDTNQQPRISIKRRPQAQGTPFTVHSADHHPQVHQSYNQNDTNLQPRISIKRRPQGPGTPSPMRSFNPQVRANHDETFNLTGNNPQQPRILVERQPQNTPLTTHRVSPQVPTRNNENYNFSDADTNSQLGERWPSDGAYGRRGWVSGSDRLSSTYDLVEQMFYLYVRVVKAKNLPPSTITSRCDPYVEVKLGNYKGRTKHFDRKLNPEWNQVFAFSKDRIQSSVLEVFVKDKAMLGRDDYLGRVVFDLNEVPTRVPPDSPLAPQWYRLEDWREEGKVRGDIMLAVWMGTQADEAFTDAWHSDAATVYGEGVFNIRSKVYMSPKLWYLRVNVIEAQDVIPSDRNRLPEVFVKAQVGCQVLTTKICPTRTTNPFWNEDLVFVASEPFEEHLTITVEDRLHPSKDEVLGKISLPMTLFEKRLDHRPVHSRWFNLEKFGFGMIEGDRRNELKFSSRIHMRVCLEGGYHVLDESTLYTSDQRPTARQLWKQPIGILEVGILGAQGLLPMKMRDGRGSTDAYCVAKYGQKWVRTRTFLDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGGEKEKAPGGTTARDSRIGKVRIRLSTLEANRIYTNSHPLLVLHPHGVKKMGELQLAVRFTALSLANIVHIYGQPLLPKMHYLHPFTVNQIDNLRYQAMNIVAARLGRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLFSGLITMGKWFSDVCLWKNHVTSVLVHILFLILIWYPELILPTVFLYMFLIGLWNYRFRPRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSRSQDVVRMRYDRIRTVAGRIQTVVGDIATQGERFQSLLSWRDPRATSLFVVFSFCAAVVLYATPFRVVALVTGLYSLRHPKFRSKLPSVPSNFFKRLPARTDSLL 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04247 1187 Gene3D C2 domain 746 908 IPR035892 -
Pste1g04247 1187 MobiDBLite consensus disorder prediction 375 416 - -
Pste1g04247 1187 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 771 909 IPR035892 -
Pste1g04247 1187 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 607 762 IPR035892 -
Pste1g04247 1187 MobiDBLite consensus disorder prediction 146 231 - -
Pste1g04247 1187 Pfam Plant phosphoribosyltransferase C-terminal 1032 1187 IPR013583 -
Pste1g04247 1187 Gene3D C2 domain 1 147 IPR035892 -
Pste1g04247 1187 Gene3D C2 domain 441 586 IPR035892 -
Pste1g04247 1187 CDD C2A_MCTP_PRT_plant 2 128 - -
Pste1g04247 1187 CDD C2D_MCTP_PRT_plant 772 904 IPR047255 -
Pste1g04247 1187 SMART C2_3c 445 542 IPR000008 -
Pste1g04247 1187 SMART C2_3c 608 708 IPR000008 -
Pste1g04247 1187 SMART C2_3c 772 884 IPR000008 -
Pste1g04247 1187 SMART C2_3c 2 103 IPR000008 -
Pste1g04247 1187 MobiDBLite consensus disorder prediction 256 331 - -
Pste1g04247 1187 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 2 1187 IPR047259 -
Pste1g04247 1187 Pfam C2 domain 2 106 IPR000008 -
Pste1g04247 1187 Pfam C2 domain 607 713 IPR000008 -
Pste1g04247 1187 Pfam C2 domain 771 887 IPR000008 -
Pste1g04247 1187 Pfam C2 domain 445 548 IPR000008 -
Pste1g04247 1187 FunFam C2 domain-containing protein 594 741 - -
Pste1g04247 1187 ProSiteProfiles C2 domain profile. 427 548 IPR000008 -
Pste1g04247 1187 FunFam C2 domain-containing protein 754 911 - -
Pste1g04247 1187 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Pste1g04247 1187 MobiDBLite consensus disorder prediction 150 176 - -
Pste1g04247 1187 CDD C2C_MCTP_PRT_plant 608 760 IPR047258 -
Pste1g04247 1187 ProSiteProfiles C2 domain profile. 754 885 IPR000008 -
Pste1g04247 1187 ProSiteProfiles C2 domain profile. 590 711 IPR000008 -
Pste1g04247 1187 MobiDBLite consensus disorder prediction 256 351 - -
Pste1g04247 1187 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 445 584 IPR035892 -
Pste1g04247 1187 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 128 IPR035892 -
Pste1g04247 1187 Gene3D C2 domain 595 739 IPR035892 -
Pste1g04247 1187 FunFam C2 domain-containing protein 440 586 - -
Pste1g04247 1187 CDD C2B_MCTP_PRT_plant 445 571 IPR047257 -
Pste1g04247 1187 MobiDBLite consensus disorder prediction 375 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04247 Pste-Chr1 26880822 26884385 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04247 1 26880822 26884385 Pste1g04247 1 26880822 26884385 ECH