Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04153 ATGCCACCCTATTGCAGATTAGTCTCTCTATATTTGAAGCACGCTATGGAGCTTAAGCAAGAGAGAATGGTATCTTTGATGTACTTGTGGATGTGGTGGAGTACTTGTATTCATGTTAAAGCAGAAACTGATAGTTTAAGACCTGGTGATAGCCTGAATCACGCAATAATACCAACATTTTATTCTAATCACCGCAAGTATTATCTAGCTTTTGGTGCAACATCTGAGGAGAATGATTACTTGGTTGTATGGAATAATGAGCGTTTGACAGTTTGGATCGGTAATAGAAACCAACCTGTTGACCCAAAATCTGCAAGTCTAACCCTAAACCATTCTGGTGTGCTTAAAATAGTATCTCAACATGAGAAAGGCACAATCTTTTATTCTCCACCTCAACCTATCAACAACACTGTGGCTACCTTGTTGGATACAGGCAACTTTGTGGTTCAACAACTTCACCCCAATAGGACTAAGACCACCTTGTGGCAGAGTTTTGACACTCCAATATTCACTTTGATCCCCACTATGAAGTTAGGTGTTAATCACAAAACAGGCCATCATTGGCTACTCGTGTCACCATTGAGTAACTTACTTATATCTCCTGGTGCCTTTACTCTTGAATGGGAACACATGGAGCAAGAACTTGTCATAAAGAGACGTGGAAAAGTTTGTTGGCGAAGTGGGAAACTGAACAACAACAGATTTGAGCGCATTCCTGAGGATGCGCAAGGGTTGTTGAAGTACAACGTTGTATCTAATGGGGACGAGAACTCCTTCTCTTTCACAACTACTAGCAATGAAGACATTTCATGGGAACTTTCGGAAAGTGGAACATTACGTAAGTATAATGGGCCGTTTGTGTGGGCTAATCTGTGTTATGGATACAACAACAGTGTTGGAGGGTGCCAAAGATGGCAGGAAATTCCAAAGTGTAGGAAACCTGGTGATGTGTTTGAGGAAAATACTATCTATAATTACAGCGAATATCAGAATCTAATATATGAATCAAATTCGAGTTATGGACTCAGTGATTGCCAGTCCAAGTGCTGGAGTAATTGTAGCTGTGCTGGATTCAAAAAACTCTATTCCAATGGAACTGGATGTATATTCTTTCATGGGAATCTAAGAAAGCATATCATTGTTGGCGAGAAGAGTGTAACCCTTTACATGATTGTGAACAAAAACCAGAATCACGATGAGAAGTGGAAAAGAATGGTAACAAAGATGTTATGTTTAACAACTTGCAACAGATCATCTGATATGGAAGAATTTGAAGATGATTTGAAAAAGGGACACGAGTTAAAAGTGTTTGATTATACATCGATGGTTACAGCTACAAACGGGTTTTCATCTGACAATATGTTAGGACAGGGTGGTTTTGGACCAGTTTATAAGATTGACTACATTAATTCATATAGTACACGTTCTAACACATTTGTATTTTTCCACTTGGAAGATTCTACTAGAAGCAATTTACTAGATTGGAGGAAGCGCTTGAGCATAATAGAAGGAATTTCTCAAGGATTATTATATCTTCATAAATACTCGAGACTCAAAGTCATTCACAGAGATTTGAAAGCTAGTAATATTCTTCTTGATAAAAATATGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTTCGTGCCACCTGAATCTATACCATATACCAATAGAATTGTTGGAACATATGGTTACATGTCTCCAGAATATGCTATGGAAGGAGTTTTTTCTACCAAGTCTGATGTCTATAGCTTTGGAGTATTGCTACTTGAAATTGTTAGTGGAAGAAGAAACACGAGTTTTTATGATGCTTACCACCCATTAAATTTAATAGGACATGCATGGGAGTTATGGAATGATGGTGAATGTCTACAAACAGTGGATCCATCACTAAATGATTTGTTTGATCCTCATGAGGTGCAAAGATGA 1935 0.3788 MPPYCRLVSLYLKHAMELKQERMVSLMYLWMWWSTCIHVKAETDSLRPGDSLNHAIIPTFYSNHRKYYLAFGATSEENDYLVVWNNERLTVWIGNRNQPVDPKSASLTLNHSGVLKIVSQHEKGTIFYSPPQPINNTVATLLDTGNFVVQQLHPNRTKTTLWQSFDTPIFTLIPTMKLGVNHKTGHHWLLVSPLSNLLISPGAFTLEWEHMEQELVIKRRGKVCWRSGKLNNNRFERIPEDAQGLLKYNVVSNGDENSFSFTTTSNEDISWELSESGTLRKYNGPFVWANLCYGYNNSVGGCQRWQEIPKCRKPGDVFEENTIYNYSEYQNLIYESNSSYGLSDCQSKCWSNCSCAGFKKLYSNGTGCIFFHGNLRKHIIVGEKSVTLYMIVNKNQNHDEKWKRMVTKMLCLTTCNRSSDMEEFEDDLKKGHELKVFDYTSMVTATNGFSSDNMLGQGGFGPVYKIDYINSYSTRSNTFVFFHLEDSTRSNLLDWRKRLSIIEGISQGLLYLHKYSRLKVIHRDLKASNILLDKNMNPKISDFGMARMFVPPESIPYTNRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLLEIVSGRRNTSFYDAYHPLNLIGHAWELWNDGECLQTVDPSLNDLFDPHEVQR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04153 644 SUPERFAMILY Protein kinase-like (PK-like) 432 639 IPR011009 -
Pste1g04153 644 SMART serkin_6 449 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04153 644 Pfam D-mannose binding lectin 90 192 IPR001480 -
Pste1g04153 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Pste1g04153 644 SMART blect_4 51 168 IPR001480 -
Pste1g04153 644 Pfam PAN-like domain 335 376 IPR003609 -
Pste1g04153 644 ProSiteProfiles Bulb-type lectin domain profile. 43 162 IPR001480 -
Pste1g04153 644 ProSiteProfiles Protein kinase domain profile. 375 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04153 644 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 142 464 - -
Pste1g04153 644 Pfam Protein kinase domain 493 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04153 644 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 190 IPR036426 -
Pste1g04153 644 FunFam Lectin-domain containing receptor kinase A4.3 476 644 - -
Pste1g04153 644 Gene3D Phosphorylase Kinase; domain 1 409 486 - -
Pste1g04153 644 Gene3D Transferase(Phosphotransferase) domain 1 487 644 - -
Pste1g04153 644 Gene3D - 37 166 IPR036426 -
Pste1g04153 644 ProSiteProfiles PAN/Apple domain profile. 311 393 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04153 Pste-Chr1 25280841 25285328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04153 426 644 Receptor kinase-like Gene Family AT4G23280 49.545 4.16e-61 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04153 Pkinase 1.1e-25 CL0016