Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04152 ATGGCCCTTGATGCCGTAGGGATTTTGTTGTCTTTAAGTGCAATGAGGCTTGGGAATGAACTATTTGCACAACTGCACTCCAAAGCCACTCATCTTTGTGGCAGAATTCCAAAGCTGAAATTAGTCTCTCTATATTTGAAGCACGCTATGGAGCTTAAGCAAGAGAGAATGGTATCTTTGATGTACTTGTGGATGTGGTGGAGTAGTTGTATTCATGTTAAAGCAGAAACTGATAGTTTAAGACCAGGTGATAGCCTGAATCACACAATAACACCAAAATTATATTCTAATCACCGCAAGTATTATTTAGGTTTTGCTGCAACATCTGAGGAGAATGATTACTTGGTTGTATGGAATAATGAGGGTGAGCCAGTTTGGGTCGGTAATAGAAACCAACCTGTTGACCCAAAATCTGCAATTCTAACCCTAAACCATTCTAGTGTGCTTAAAATAGAATCTCAACATGAGAAAGGCACAATCATTTATTCTCCACCTCAACCTATCAACAACACTGTGGCTACCTTGTTGGATACAGGCAACTTTGTGCTTCAACAACTTCGCCCCAATGGGACTAATACCACCTTGTGGCAGAGTTTTGACACTCCCACATTCACTTTGATCCCCACTATGAAGTTAGGTGTTAATCACAAAACAGGCCATCATTGGCTACTCGTGTCACCATTGAGTAACTCAGTTATGTCTCCTGGTGCCTTTACTCTTGAATGGGAACACATGGAGCAAGAACTTGTCATAAAGAGACGTGGAAAAGTTTGTTGGCGAAGTGGGAAACTGAACAACAACAGATTTGAGCACATTCCTGAGGATGCGCAAGGGTTGTTGAAGTACAACGTTGTATCTACTGGGGACGACAGCTCCTTCTCTTTCACAACTACTAGCGATGAAGACATTTCATGGCGACTTTCGAAAAGTGGAAGATTACATAAGTATAATGGGCCGTTTGTGTGGGCTAATCTGTGTTATGGATACAACAACAGTGTTGGAGGGTGCCAAAGATGGCAGGAAATTCCAAAGTGTAGGAAACCTGGTGATGTGTTTGAGGAAAATACTATCTATAATTACAGCGAATATCAGAATCTAATATATGAATCAAATTCGAGTTATGGACTCAGTGATTGCCAGTCCAAGTGCTGGAGTAATTGTAGCTGTGCTGGATTCAAAAAACTCTATTCCAATGGAACTGGATATGAGAAGTGGAAAAGAATGGTAACAAAGATGTTATGTTTAACAACTTGCAACAGATCATCTGATATGGAAGAATTTGAAGATGATTTGAAAAAGGGACACGAGTTAAAAGTGTTTGATTATACATCGATGGTTACAGCTACAAACGGGTTTTCATCTGACAATATGTTAGGACAGGGTGGTTTTGGACCAGTTTATAAGGGAATCTTGCCAACAGGACAAGAGATTGCTTTGAAAAGACTTTCAAAGACTTCTAGACAAGGAATTGAAGAATTTAAAAATGAACTAAGACTTATATGTGAACTTCAACATATGAATCTTGTACAACTACTCGGTTACTGCATTCATGAAGAAGAGAGGATTTTAGTTTATGAAGGGAGTTTGTATAGACTAATTCACCGGCCTAACAATCAATTAGATAAGCGGTTGCGAATGGCCCTTGATGCCGTAGGGATTTTGTTGTCTTTAAGTGCAATGAGGCTTGGGAATGAACTATTTGCACAACTGCACTCCAAAGCCACTCATCTTTGTGGCAGAATTCCAAAGCTGAAATTAGTCTCTCTATATTTGAAGCACGCTATGGAGCTTAAGCAAGAGAGAATGGTATCTTTGATGTACTTGTGGATGTGGTGGAGTAGTTGTATTCATGTTAAAGCAGAAACTGATAGTTTAAGACCAGGTGATAGCCTGAATCACACAATAACACCAAAATTATATTCTAATCACCGCAAGTATTATTTAGGTTTTGCTGCAACATCTGAGGAGAATGATTACTTGGTTGTATGGAATAATGAGGGTGAGCCAGTTTGGGTCAGTAATAGAAACCAACCTGTTGACCCAAAATCTGCAATTCTAACCCTAAACCATTCTAGTGTGCTTAAAATAGAATCTCAACATGAGAAAGGCACAATCATTTATTCTCCACCTCAACCTATCAACAACACTGTGGCTACCTTGTTGGATACAGGCAACTTTGTGCTTCAACAACTTCGCCCCAATGGGACTAATACCACCTTGTGGCAGAGTTTTGACACTCCCACATTCACTTTGATCCCCACTATGAAGTTAGGTGTTAATCACAAAACAGGCCATCATTGGCTACTCGTGTCACCATTGAGTAACTCAGTTATGTCTCCTGGTGCCTTTACTCTTGAATGGGAACACATGGAGCAAGAACTTGTCATAAAGAGACGTGGAAAAGTTTGTTGGCGAAGTGGGAAACTGAACAACAACAGATTTGAGCACATTCCTGAGGATGCGCAAGGGTTGTTGAAGTACAACGTTGTATCTACTGGGGACGACAGCTCCTTCTCTTTCACAACTACTAGCGATGAAGACATTTCATGGCGACTTTCGAAAAGTGGAAGATTACATAAGTATAATGGGCCGTTTGTGTGGGCTAATCTGTGTTATGGATACAACAACAGTGTTGGAGGGTGCCAAAGATGGCAGGAAATTCCAAAGTGTAGGAAACCTGGTGATGTGTTTGAGGAAAATACTATCTATAATTACAGCGAATATCAGAATCTAATATATGAATCAAATTCGAGTTATGGACTCAGTGATTGCCAGTCCAAGTGCTGGAGTAATTGTAGCTGTGCTGGATTCAAAAACTCTATTCAATGGAACTGGATGTATATTCTTTCATGGGAATCTAAGAAAGCATATCATTGTTGGCGAGAAGAGTGTAACCCTTTACATGATTGTGAACAAAACCAGAATCACGATGAGAAGTGGAAAAGAATGGTAACAAAGATGTTATGTTTAACAACTTGCAACAGATCATCTGATATGGAAGAATTTGAAGATGATTTGAAAAAGGGACACGAGTTAAAAGTGTTTGATTATACATCGATGGTTACAGCTACAAACGGGTTTTCATCTGACAATATGTTAGGACAGGGTGGTTTTGGACCAGTTTATAAGGCATGGGAGTTATGGAATGATGGTGAATGTCTACAAATAGTGGATCCATCACTAAATGATTTGTTTGATCCTCATGAGGTGCAAAGATGCATTCATGTGGGTCTCTTATGTGTGGAACAGTATGCAAATGATCGACCAACAATGTCTGCCATTATATCAATGTTAACAAACAAGAGCACAATAATTTCCTTACCTCAAAAACCAGCATTCTATGTTATAAGAGGCACATTTGGTGAAAAATTATCATCAAAAGAGTTGTGTACTGATTCTACACCAGAAATTACAGCCTCCAACAAAATGGAATCAAGGTAA 3441 0.3944 MALDAVGILLSLSAMRLGNELFAQLHSKATHLCGRIPKLKLVSLYLKHAMELKQERMVSLMYLWMWWSSCIHVKAETDSLRPGDSLNHTITPKLYSNHRKYYLGFAATSEENDYLVVWNNEGEPVWVGNRNQPVDPKSAILTLNHSSVLKIESQHEKGTIIYSPPQPINNTVATLLDTGNFVLQQLRPNGTNTTLWQSFDTPTFTLIPTMKLGVNHKTGHHWLLVSPLSNSVMSPGAFTLEWEHMEQELVIKRRGKVCWRSGKLNNNRFEHIPEDAQGLLKYNVVSTGDDSSFSFTTTSDEDISWRLSKSGRLHKYNGPFVWANLCYGYNNSVGGCQRWQEIPKCRKPGDVFEENTIYNYSEYQNLIYESNSSYGLSDCQSKCWSNCSCAGFKKLYSNGTGYEKWKRMVTKMLCLTTCNRSSDMEEFEDDLKKGHELKVFDYTSMVTATNGFSSDNMLGQGGFGPVYKGILPTGQEIALKRLSKTSRQGIEEFKNELRLICELQHMNLVQLLGYCIHEEERILVYEGSLYRLIHRPNNQLDKRLRMALDAVGILLSLSAMRLGNELFAQLHSKATHLCGRIPKLKLVSLYLKHAMELKQERMVSLMYLWMWWSSCIHVKAETDSLRPGDSLNHTITPKLYSNHRKYYLGFAATSEENDYLVVWNNEGEPVWVSNRNQPVDPKSAILTLNHSSVLKIESQHEKGTIIYSPPQPINNTVATLLDTGNFVLQQLRPNGTNTTLWQSFDTPTFTLIPTMKLGVNHKTGHHWLLVSPLSNSVMSPGAFTLEWEHMEQELVIKRRGKVCWRSGKLNNNRFEHIPEDAQGLLKYNVVSTGDDSSFSFTTTSDEDISWRLSKSGRLHKYNGPFVWANLCYGYNNSVGGCQRWQEIPKCRKPGDVFEENTIYNYSEYQNLIYESNSSYGLSDCQSKCWSNCSCAGFKNSIQWNWMYILSWESKKAYHCWREECNPLHDCEQNQNHDEKWKRMVTKMLCLTTCNRSSDMEEFEDDLKKGHELKVFDYTSMVTATNGFSSDNMLGQGGFGPVYKAWELWNDGECLQIVDPSLNDLFDPHEVQRCIHVGLLCVEQYANDRPTMSAIISMLTNKSTIISLPQKPAFYVIRGTFGEKLSSKELCTDSTPEITASNKMESR 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04152 1146 SMART blect_4 83 202 IPR001480 -
Pste1g04152 1146 SMART blect_4 628 747 IPR001480 -
Pste1g04152 1146 Gene3D Phosphorylase Kinase; domain 1 413 526 - -
Pste1g04152 1146 Pfam D-mannose binding lectin 125 226 IPR001480 -
Pste1g04152 1146 Pfam D-mannose binding lectin 670 771 IPR001480 -
Pste1g04152 1146 Gene3D - 616 745 IPR036426 -
Pste1g04152 1146 Gene3D - 71 200 IPR036426 -
Pste1g04152 1146 ProSiteProfiles Bulb-type lectin domain profile. 77 196 IPR001480 -
Pste1g04152 1146 Pfam Protein tyrosine and serine/threonine kinase 455 536 IPR001245 GO:0004672|GO:0006468
Pste1g04152 1146 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 73 542 - -
Pste1g04152 1146 SUPERFAMILY Protein kinase-like (PK-like) 437 546 IPR011009 -
Pste1g04152 1146 Gene3D Transferase(Phosphotransferase) domain 1 971 1116 - -
Pste1g04152 1146 SUPERFAMILY Protein kinase-like (PK-like) 1012 1052 IPR011009 -
Pste1g04152 1146 SUPERFAMILY alpha-D-mannose-specific plant lectins 124 224 IPR036426 -
Pste1g04152 1146 SUPERFAMILY alpha-D-mannose-specific plant lectins 669 769 IPR036426 -
Pste1g04152 1146 ProSiteProfiles Bulb-type lectin domain profile. 622 741 IPR001480 -
Pste1g04152 1146 ProSiteProfiles Protein kinase domain profile. 452 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04152 1146 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 417 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04152 Pste-Chr1 25264805 25280188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04152 430 541 Receptor kinase-like Gene Family AT4G04500 57.143 3.53e-29 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04152 B_lectin 5.6e-24 No_clan