Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04150 AGGGAGTTTGTATAGACTAATTCACCGGCCTAACAATCAATTAGATAAGCGGTTGCGAATGGCCCTTGATGCCGTAGGGATTTTGTTGTCTTTAAGTGCAATGAGGCTTGGGAATGAACTATTTGCACAACTGCACTCCAGTGATAGTGCATCGCGGAGAAACTTTGAAACGACTGCTGCCGTAAACAGATCTTTTCATTTTGTCTTGACATGTGCTGATAGAAGCCACTCATCTTTGTGGCAGAATTCCAAAGCTGAACACGCTATGGAGCTTAAGCAAGAGAGAATGGTATCTTTGATGTACTTGTGGATGTGGTGGAGTACTTGTATTCATGTTAAAGCAGAAACTGATAGTTTAAGACCTGGTGATAGCCTGAATCACGCAATAATACCAACATTTTATTCTAATCACCGCAAGTATTATCTAGCTTTTGGTGCAACATCTGAGGAGAATGATTACTTGGTTGTATGGAATAATGAGCGTTTGACAGTTTGGATCGGTAATAGAAACCAACCTGTTGACCCAAAATCTGCAAGTCTAACCCTAAACCATTCTGGTGTGCTTAAAATAGTATCTCAACATGAGAAAGGCACAATCTTTTATTCTCCACCTCAACCTATCAACAACACTGTGGCTACCTTGTTGGATACAGGCAACTTTGTGGTTCAACAACTTCACCCCAATAGGACTAAGACCACCTTGTGGCAGAGTTTTGACACTCCAATATTCACTTTGATCCCCACTATGAAGTTAGGTGTTAATCACAAAACAGGCCATCATTGGCTACTCGTGTCACCATTGAGTAACTTACTTATATCTCCTGGTGCCTTTACTCTTGAATGGGAACACATGGAGCAAGAACTTGTCATAAAGAGACGTGGAAAAGTTTGTTGGCGAAGTGGGAAACTGAACAACAACAGATTTGAGCGCATTCCTGAGGATGCGCAAGGGTTGTTGAAGTACAACGTTGTATCTAATGGGGACGAGAACTCCTTCTCTTTCACAACTACTAGCAATGAAGACATTTCATGGGAACTTTCGGAAAGTGGAACATTACGTAAGTATAATGGGCCGTTTGTGTGGGCTAATCTGTGTTATGGATACAACAACAGTGTTGGAGGGTGCCAAAGATGGCAGGAAATTCCAAAGTGTAGGAAAACTGGTGATGTGTTTGAGGAAAATACTATCTATAATTACAGCAAATATCAGAATGTAATCTATGAATCAAATTCGAGTTATGGACGCAGTGATTGCCAGTCCAAGTGCTGGAGTAATTGTAGCTGTGTTGGATTCAAAAATCTCTATTCCAATGGAACTGGATGTACATTCTTCCATGGGAATCTAAGGAAGTATATCATACTTGGCGACAAGAGTGTAACCATTTACATGATTCTGAACAAAAACCAGCATCACGGTAATAAGAAAAAGTGGATATGGATAACCATAGTAATCGCAGTAACGACAACTGCTCTACTCATAATATGCCTATCCATTACGTGCCTAGCCTTAAAAAACAGAAAATATAGGCTTCATGGTAATTACATACTTTATAAAGCTTGTAGTGCTTACTTTACTAAAGAAAATCTCTTCATCAATGAGAAGTGGAAAAGAATGGTAACAAAGATGTTATGTTTAACAACTTGCAACAGATCATCTGATATGGAAGAATTTGAAGATGATTTGAAAAAGGGACACGAGTTAAAAGTGTTTGATTATACATCGATGGTTACAGCTACAAATGGGTTTTCATCTGACAATATGTTAGGACAGGGTGGTTTTGGACCAGTTTATAAGGGAATCTTGCCAACAGGACAAGAGATTGCTTTGAAAAGACTTTCAAAGACTTCTAGACAAGGAATTGAAGAATTTAAAAATGAATTAAGACTTATATGTGAACTTCAACATATGAATCTTGTACAACTACTTGGTTACTGCATTCATGAAGAAGAGAGGATTTTAGTTGATGAGTATATGCCAAATAAAAGCTTGGATTTATACCTATTCGGTGAGACATATGCTAAAATAGTACACGTTGTATTTTTCCACTTGGAAGATTCTACTAGAAGCAATTTACTAGATTGGAGGAAGCTCTTGAGCATAATAGAAGGAATTTCTCAAGGATTATTATATCTTCATAAATACTCAAGACTCAAAGTCATTCACAGGGATTTGAAAGCTAGTAATATTCTTCTTTATAAAAATATGAATCCAAAAATTTCAGATTTTGGAATAGCAAGAATTGGTTACATGTCTCCAGAATATGCTTTGGAAGGAGTTTTTTCTACCAAATCTGATGTCTATAGCTTTGGAGTATTGCTACTTGAAATTGTTAGTGGAAGAAGAAACACTAGTTTTTATGATGCTTACCACCCATTAAATCTAATAGGACATACATGGGAGTTATGGAACGATGGTGAATGTCTACAAATAGTGGATCCATCACTAAATGATTTGTTTGATCCTGATGAGGTGCAAAGATGCATTCATGTCGGTCTCTTATGCGTCGAACAGTATGCAAATGATCGACCAACAATGTCTGCCATTATATCAATGTTAACAAACAAGAGCACAATAATTTCCTTACCTCAAAAACCAGCATTCTATGTTAAAAGAGACACATTGGATGAAAAGTTATCATCAAAAGAGTTGTGTACTGATTCTACACCAGAAATTACAGCCTCCGACAAAATGGAATCA 2698 0.3747 MALDAVGILLSLSAMRLGNELFAQLHSSDSASRRNFETTAAVNRSFHFVLTCADRSHSSLWQNSKAEHAMELKQERMVSLMYLWMWWSTCIHVKAETDSLRPGDSLNHAIIPTFYSNHRKYYLAFGATSEENDYLVVWNNERLTVWIGNRNQPVDPKSASLTLNHSGVLKIVSQHEKGTIFYSPPQPINNTVATLLDTGNFVVQQLHPNRTKTTLWQSFDTPIFTLIPTMKLGVNHKTGHHWLLVSPLSNLLISPGAFTLEWEHMEQELVIKRRGKVCWRSGKLNNNRFERIPEDAQGLLKYNVVSNGDENSFSFTTTSNEDISWELSESGTLRKYNGPFVWANLCYGYNNSVGGCQRWQEIPKCRKTGDVFEENTIYNYSKYQNVIYESNSSYGRSDCQSKCWSNCSCVGFKNLYSNGTGCTFFHGNLRKYIILGDKSVTIYMILNKNQHHGNKKKWIWITIVIAVTTTALLIICLSITCLALKNRKYRLHGNYILYKACSAYFTKENLFINEKWKRMVTKMLCLTTCNRSSDMEEFEDDLKKGHELKVFDYTSMVTATNGFSSDNMLGQGGFGPVYKGILPTGQEIALKRLSKTSRQGIEEFKNELRLICELQHMNLVQLLGYCIHEEERILVDEYMPNKSLDLYLFGETYAKIVHVVFFHLEDSTRSNLLDWRKLLSIIEGISQGLLYLHKYSRLKVIHRDLKASNILLYKNMNPKISDFGIARIGYMSPEYALEGVFSTKSDVYSFGVLLLEIVSGRRNTSFYDAYHPLNLIGHTWELWNDGECLQIVDPSLNDLFDPDEVQRCIHVGLLCVEQYANDRPTMSAIISMLTNKSTIISLPQKPAFYVKRDTLDEKLSSKELCTDSTPEITASDKMES 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04150 880 SMART blect_4 105 222 IPR001480 -
Pste1g04150 880 ProSiteProfiles Bulb-type lectin domain profile. 97 216 IPR001480 -
Pste1g04150 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Pste1g04150 880 Gene3D Transferase(Phosphotransferase) domain 1 639 844 - -
Pste1g04150 880 Pfam PAN-like domain 365 430 IPR003609 -
Pste1g04150 880 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 527 638 - -
Pste1g04150 880 Gene3D Phosphorylase Kinase; domain 1 524 638 - -
Pste1g04150 880 SMART serkin_6 563 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04150 880 Gene3D - 91 220 IPR036426 -
Pste1g04150 880 Pfam Protein tyrosine and serine/threonine kinase 566 833 IPR001245 GO:0004672|GO:0006468
Pste1g04150 880 FunFam Lectin-domain containing receptor kinase A4.3 639 851 - -
Pste1g04150 880 Pfam D-mannose binding lectin 144 246 IPR001480 -
Pste1g04150 880 SUPERFAMILY alpha-D-mannose-specific plant lectins 144 244 IPR036426 -
Pste1g04150 880 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 207 858 - -
Pste1g04150 880 SUPERFAMILY Protein kinase-like (PK-like) 547 856 IPR011009 -
Pste1g04150 880 PIRSF SRK 337 879 IPR024171 GO:0004674
Pste1g04150 880 PIRSF SRK 69 344 IPR024171 GO:0004674
Pste1g04150 880 ProSiteProfiles PAN/Apple domain profile. 365 447 IPR003609 -
Pste1g04150 880 ProSiteProfiles Protein kinase domain profile. 563 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04150 Pste-Chr1 25232266 25239701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04150 535 873 Receptor kinase-like Gene Family AT3G45860 48.767 9.66e-108 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste1g04150 PK_Tyr_Ser-Thr 1.5e-39 CL0016