Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04102 CCAAAACCTCGCCTTCTTCTCTTCTCGGAACCAAAACCAGACACAACCTCTCGGAGAAATCAAGGTACGGACTGTGTGCTGTGTCTGTTTGAAAATTGAGATGAAGATTCAGTGTAACGTGTGCGAGGCGACGGAGGCCAAGGTTCTCTGCTGCGCCGACGAGGCTGCGCTGTGCTGGGAATGCGATGAGAAGGTTCACGCCGCCAATAAGCTAGCCAGTAAGCACCAGAGAGTCCCTCTTTCTCTCTCTGCTTCTCACATGCCCAAGTGTGACATTTGCCAGGAAATGGTTGGTTATTTCTTCTGTTTAGAGGACCGGGCTTTGCTATGCAGGAATTGTGATGTATGTATTCACACAGCAAATGCCTGTGTCTCTGGTCATCAAAGGTTTTTGCTTACTGGTGTGAGAGTAGGCCTTGAAGCTACTGATCGTGGTACTGAGCGTGGTGCTGGTGCTTCCTCATCTTCTGTGAAGTCACAGTCTGGAGAGAAAATGTCTGATGCTAAATCTTCATCCATTTCCAGAAATGTTTCCTCGCTGCCCCAGCCATCAAATGTCAATGAAGTGTTACCCCTCCAAACGCGAGGAGTTGAGGAGTTTCCACCAAACAACTTCTCGAGTTATAGTTCTGGAAACGTCACACAATGGCCCATTGAAGAATTTCTCGGGTTAAATGAATTGAGTCAGTATTACAATTACATGGATGGATCATCTAAGGCTGACAGTGGCAAACTTGGTGATTCTGATTCTTCTGTTTTGAGGTCTAGTGAAGAGGAAATGGATGACGATGGCTTTCTGGGGCGCGTTCCGGATTCATCTTGGATAGTTCCTCAGATCCCTTCCCCTCCTACAGCTTCAGGGCTATATTGGCCTAAAGTCTCTCAATACACATCTGACAATGCCATGTTTGTTCCTGATATATGCTTTCCTCGCACGCAACAGCCCCACCAAGCTCAACATAATACTATTCTTTCAAAACAGCGTAGGCAACTATAACTTGTTCTCTTCTGTGATCACTAGCTCAGTGTGTTAAAAATATTGCTTTTAGAGATGGAGTGAGCTATTGAAGTGCTATCCATCTTTAGGGCATTTGAAGTTCATTTTGCTACTTGTTTCTTCATTCATGGCAGTCTCAGTTTGTTTTTGGGAGTAAATCTGTTAACTCTCTATTTCTCATTGGGAGTTTGACAAAGAAAGTAGCTGTAAAGGCAATGTAAAAGGCTTCTCATTTGATTTTGATCTTGTGCATTTTAACTTGTAGCTCTTGACTACAACATACATGCATGTATTTGGTCATCATAGAGATCCTGTTCAATATAAGCTGGTTCTTGTAAAAGTTTCGTTTGCCCCTTATCAAGGTCAACATTATTAATTTATTATTTTACAAGTGGTGACAACAAATTGTGGATACTTCAGTGTTAATAATCATAGTGTGG 1437 0.4301 MKIQCNVCEATEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSLSASHMPKCDICQEMVGYFFCLEDRALLCRNCDVCIHTANACVSGHQRFLLTGVRVGLEATDRGTERGAGASSSSVKSQSGEKMSDAKSSSISRNVSSLPQPSNVNEVLPLQTRGVEEFPPNNFSSYSSGNVTQWPIEEFLGLNELSQYYNYMDGSSKADSGKLGDSDSSVLRSSEEEMDDDGFLGRVPDSSWIVPQIPSPPTASGLYWPKVSQYTSDNAMFVPDICFPRTQQPHQAQHNTILSKQRRQL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04102 298 Gene3D Classic Zinc Finger 1 92 - -
Pste1g04102 298 MobiDBLite consensus disorder prediction 218 233 - -
Pste1g04102 298 MobiDBLite consensus disorder prediction 115 153 - -
Pste1g04102 298 CDD Bbox1_BBX-like 5 47 - -
Pste1g04102 298 SMART bboxneu5 52 99 IPR000315 GO:0008270
Pste1g04102 298 SMART bboxneu5 4 47 IPR000315 GO:0008270
Pste1g04102 298 MobiDBLite consensus disorder prediction 110 153 - -
Pste1g04102 298 MobiDBLite consensus disorder prediction 205 233 - -
Pste1g04102 298 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 281 - -
Pste1g04102 298 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pste1g04102 298 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Pste1g04102 298 CDD Bbox1_BBX-like 56 99 - -
Pste1g04102 298 FunFam B-box zinc finger protein 22 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04102 Pste-Chr1 24183805 24187895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04102 1 298 C2C2-CO-like Transcription Factor Family AT1G78600 44.706 2.62e-84 254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04102 1 24183805 24187895 Pste1g04102 1 24183805 24187895 ECH