Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04100 GATAGCTTAGCTTCAGTGTGGTCTCACTCTACGTTATCCAAGGCATAGGCGAAGCAGATAGAAAGATAGATTCACTGTGCAGCACAACACAATGGCGCTGCTGTGCGGTTCAGCTTCGGTGACTCCAATGTTCCTTTCTCACAACACCAACGTTGCTGTCACTGTCTCTGCCTCAACCAAATCCTCCTTCGTTGGTTTCCAATTCCACCTTCCAAAGCTCTCATTTTCTTCCTCCGTTCCAACCCTTTCACCCACATCTTTTCGCGTTCGTTGTCAAGAGGACTCTTCCGCCGCCGCAACCGTCGCCGCCTCCGCCGCCGCTCCTGTCACCGAGGACCCGCGCTTCGCCTGCGTCGAACCGGAACCCCGGTTCAAAGGGCCGGACATTTGGAACAAGAGCTGGTACCCAAAAGCTGCAGATCATGTGAACACAGAGAAAACATGGTATGTTGTTGATGCTACAGACAAAGTTCTTGGAAGACTAGCTTCAACAATTGCTATTCACATTCGAGGAAAAAACTTGGCAACCTACACACCCAGTGTGGACATGGGTGCATTTGTAATTGTGGTAAATGCAGAAAAGGTTGCTGTATCTGGGAAAAAGAGGACCCAAAAGCTTTATAGGAGGCACTCTGGACGACCTGGTGGTATGACGGTGGAGACATTTGCCCAGCTGCAAAACAGAATTCCTGAAAGAATTATTGAACATGCCGTACGTGGCATGCTTCCAAAAGGAAGGCTTGGCAGAAGACTATTCACCCACCTAAAGGTTTACAAGGGCCCAGATCATCCACATGCGGCACAGAAGCCCATTGACTTGCCTATAAGGGATAAGAGAATACAGTTGCAGAAATAGATCAGATAGAAGAGAACTTGAAACTAAATATGACAATTTGTATCTGTATCCATTTCACAGAACATCAAGTTTCCTGCTTTGGCTGCTACCTTGCTGATGTCTTCCATTAATGTTTATATTGTCTGTAGAGGTAACTGATTATTGTATTACTTGTTTTTGTCCAAGTCCATTTTGTCTAATCTTCGTAACATTTTTTGTAGATTTAAATCTTTGACATGCAATATTTTTAACATACTTGAATTTATCGTCAACTTTTTTCTATCCAAG 1123 0.447 MALLCGSASVTPMFLSHNTNVAVTVSASTKSSFVGFQFHLPKLSFSSSVPTLSPTSFRVRCQEDSSAAATVAASAAAPVTEDPRFACVEPEPRFKGPDIWNKSWYPKAADHVNTEKTWYVVDATDKVLGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFAQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYKGPDHPHAAQKPIDLPIRDKRIQLQK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04100 254 Hamap 50S ribosomal protein L13 [rplM]. 118 253 IPR005822 GO:0003735|GO:0005840|GO:0006412
Pste1g04100 254 Pfam Ribosomal protein L13 116 234 IPR005822 GO:0003735|GO:0005840|GO:0006412
Pste1g04100 254 CDD Ribosomal_L13 118 231 IPR005822 GO:0003735|GO:0005840|GO:0006412
Pste1g04100 254 FunFam 50S ribosomal protein L13 102 245 - -
Pste1g04100 254 SUPERFAMILY Ribosomal protein L13 112 245 IPR036899 GO:0003735|GO:0005840|GO:0006412
Pste1g04100 254 PANTHER RIBOSOMAL PROTEIN L13 103 249 IPR005822 GO:0003735|GO:0005840|GO:0006412
Pste1g04100 254 NCBIfam 50S ribosomal protein L13 112 243 IPR005823 GO:0003735|GO:0005840|GO:0006412
Pste1g04100 254 ProSitePatterns Ribosomal protein L13 signature. 208 230 IPR023563 GO:0003735|GO:0005840|GO:0006412
Pste1g04100 254 Gene3D Ribosomal protein L13 107 250 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04100 120 253 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 31.852 3.28e-07 47.8