Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04089 ATGGTTGGTTCTCTTTCCCTTACACTCATCCAGTTGAAGAAGAAAACCAAAGCCACAATCATGGCATGCAAAAAGCAAGCTTTGCTCATTCTTTTCTTATCCCTTTTCACATTCTCCACTTCACACCCTGATAATGGTGGCATAGCTGTGTATTGGGGCCAAGACAGTAGAGAGGGTGATTTGAAAAGCACGTGTGACAGTGGAAAGTATGCGATTGTGGTTCTTGGTTTTCTCAGTAAGTTCGGTGCTGGAAGAACCCCAGTTTTGAACTTTGCTGGCCACTGTGGCAATGGTTCCTGGAAAAAGTGCACTGAACTTGAGTTCCAAATCAAACACTGTCAGGCGAAAGGCATTAGAGTGCTCCTTTCAATCGGAGGAGCCTCTTCGGAGTACTCGCTCATCTCGGCGGCGGACGCGAAAACCGTCGCTAACTACCTCTTCTCTAACTTCCTGAGCGGCCAGTACGGTCCTCTGGGAGCCGTAACCCTAGACGGGATCGATTTCAGCATCGAAAACAGTGAGAACCACTGGGACGTCCTCGCGGCGGAGCTGGACTCTCTCCGCCGCAGCCGAGGCCCCTACTTTTTCCTCTCCGGCGCCGTGCACTGCTCCTCCCCAGCTCCGTTCCCGACGGACCTCTTCGAATACATCTTCGTGAAGTTCTTCAACAACCCCACCTGCGCCTACTCCAACGCCAACGCCAACGCCAACGCCACTCCCCTCTTGAACTCGTGGGACTACTGGGTGAACTCGGTTCTCTCCAACAACTCCCTCTTCCTCGGACTTCCCGCCACCTCCAGTGCCGTTACCGGTTACATTCCCTCGCACGTGCTCAAACACGACATTCTCCCGCACGTGAAGAAAGCCTCGAACTACGAAGGAGTTGTGCTGTGGGACAGACACACTGACAACCAAAACGGTTACAGCGCTTCCATCCTGTTCCATGTGCTTAAAACGCCCTTGATCTCTGTGACTTCCGTTTCCGACGCCATCTATCAGTGTGTCTCAAAGGTGATGAACCGTGCCTATGCTGATCACTAGATAATAGCTAGCTATATGGCAATACTGCCATCAATGCCTGTATTTACCTACGCAATAATTCGCTTGTCGCCTATGCTTTCGCTTCTGCTCTCTCTGTCTACTTAATGTCCTATATCTTTTTCTTGCTTTTAATATAACCTTTCATATTTCCTACCACAATTCATCATCCTTCTAAATAAATAATAAATAATAATAATAA 1240 0.4911 MVGSLSLTLIQLKKKTKATIMACKKQALLILFLSLFTFSTSHPDNGGIAVYWGQDSREGDLKSTCDSGKYAIVVLGFLSKFGAGRTPVLNFAGHCGNGSWKKCTELEFQIKHCQAKGIRVLLSIGGASSEYSLISAADAKTVANYLFSNFLSGQYGPLGAVTLDGIDFSIENSENHWDVLAAELDSLRRSRGPYFFLSGAVHCSSPAPFPTDLFEYIFVKFFNNPTCAYSNANANANATPLLNSWDYWVNSVLSNNSLFLGLPATSSAVTGYIPSHVLKHDILPHVKKASNYEGVVLWDRHTDNQNGYSASILFHVLKTPLISVTSVSDAIYQCVSKVMNRAYADH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04089 346 Pfam Glycosyl hydrolases family 18 48 271 IPR001223 GO:0005975
Pste1g04089 346 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 46 319 IPR001223 GO:0005975
Pste1g04089 346 Gene3D Glycosidases 44 328 - -
Pste1g04089 346 PANTHER ENDOCHITINASE 27 312 - -
Pste1g04089 346 SUPERFAMILY (Trans)glycosidases 43 313 IPR017853 -
Pste1g04089 346 CDD GH18_hevamine_XipI_class_III 46 312 IPR045321 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04089 Pste-Chr1 23932515 23935078 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04089 19 316 Glycoside Hydrolase AT5G24090 45.223 1.96e-82 251
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04089 1 23932515 23935078 Pste1g04089 1 23932515 23935078 ECH