Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04085 TGATCCACATAACCAAGAAACAACAACACTATCCACAATTTCATGGCTTACAAAACGCAAGCTTTGGTCTCACTCATTCTGTTATCTCTTTTAACATTCTCATCCTCACAACCCAACAATGGTCTTCTTGGTGTGTATTGGGGCCAAGGCCATCGTGAAGACGATTTGAAAACCACATGCGACACGGGCAAATATGAGATTGTGCTCCTGGCTTATCTGATCGTGTTTGGTGATGGCCAAGAACCGTTTCTTTACCTCTATAACCACTGTTATAATCATGATTGCACTGGACTAGAACCCCAGATTAAGCACTGCCAGGCTAAAGGCATAAAGGTATTCCTTTCCCTTGGAGGACCCTTTTGGGAAATGTACTCTCTAAACTCTACGAATGATGCAAAGGAGGTGGCTAAGTACCTACACACCAACTTCCTCACTGGCAAACACGGTCCATTGGGAAGTGTGTATTTAGACGGCATCGAATTCAACATAAGATGGACAAAAGATCATTGGGATGACCTGGTTAAGGAACTCCACTTTCTCCGACACACGAAAGGCCCTCACTTTCTCTTATCGGCAGCTCCTCTCTGTCACATCCCTGTTCTCTTTCTCGACAAGGCTATCCAAACCCAACTCTTCGACCACATCTTCGTCCGATTCTACGACGACGAATCCTGCGAATATAACATCCTTACTAACGACACCCAGCCTCTGTTGGAGTCGTGGGACAACTGGGTGAACTTGGTTCCATTTGGGTCCAACAACTCCTTGTTTCTGGGCTTGCCGGCGGCGATAACTGCTTCCGGAACGGGTTTTGCTCCGGCCACTGTGGTGAATAACCAGGTACTTCCGCATGTCAAGAAAGATCCCATCTATGGAGGAGTCATTTTGTTTGATAGTTACCGTGACACTATAACCAATTTCAGTGGAAGGATACTACCCAATTTGCGTAAATCCAACAACTTCCTATTCTCTGCGTCTTAAACTTGTCTTGCATGCATCATTGTTTCAACTTATGTATTTATTTCTGTCTCAACTAATCAGTCATCTGATATTTAATGGATGATCTTTATTGATAGTTTGACACAATAATTAAAACATCAATAATTATTGGCACAGAGAATTTTCATTTGTTGTATGCATATATCATCCCAACCAAATAAAGATCCTTAATCC 1173 0.4288 MAYKTQALVSLILLSLLTFSSSQPNNGLLGVYWGQGHREDDLKTTCDTGKYEIVLLAYLIVFGDGQEPFLYLYNHCYNHDCTGLEPQIKHCQAKGIKVFLSLGGPFWEMYSLNSTNDAKEVAKYLHTNFLTGKHGPLGSVYLDGIEFNIRWTKDHWDDLVKELHFLRHTKGPHFLLSAAPLCHIPVLFLDKAIQTQLFDHIFVRFYDDESCEYNILTNDTQPLLESWDNWVNLVPFGSNNSLFLGLPAAITASGTGFAPATVVNNQVLPHVKKDPIYGGVILFDSYRDTITNFSGRILPNLRKSNNFLFSAS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04085 312 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 27 312 IPR001223 GO:0005975
Pste1g04085 312 PANTHER ENDOCHITINASE 7 297 - -
Pste1g04085 312 SUPERFAMILY (Trans)glycosidases 25 297 IPR017853 -
Pste1g04085 312 Pfam Glycosyl hydrolases family 18 30 229 IPR001223 GO:0005975
Pste1g04085 312 Gene3D Glycosidases 26 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04085 Pste-Chr1 23866748 23870171 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04085 1 301 Glycoside Hydrolase AT5G24090 39.216 4.29e-71 221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04085 1 23866748 23870171 Pste1g04085 1 23866748 23870171 ECH