Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03922 CGACGCTTTAAGACCAAAAGCACCGTCTCCACTTTCCACTTCGTTCGCTTTTTCCAAAACCATCACATCACTCTCGTCGCCGCTGTCAACCACCGCAAGCGCCGTCGCACTCCGCCTTCTTCGTTAGGGCAAAAATGAGTCGAGGAAGTGGAGGCGGATACGATCGTCACATCACTATTTTCTCCCCCGAAGGACGTCTCTTCCAAGTTGAGTATGCTTTCAAGGCTGTTAAAGCAGCTGGAATCACCTCAATTGGTGTCCGAGGAAAGGATTCAATTTGTGTTGTTACTCAGAAGAAGGTTCCGGATAAGCTTTTGGACCAGACAAGTGTTACACACCTCTTTCCCATCACAAAGTACCTTGGTTTGTTGGCGACTGGCATGACAGCTGATGCTAGGACACTGGTCCAACAAGCAAGAAATGAAGCAGCTGAGTTTCGCTTTACATATGGATATGAGATGCCTGTAGATGTATTGGCCAAATGGATTGCAGACAAATCACAAGTCTATACTCAACATGCTTACATGAGACCACTTGGAGTAGTTGCTATGGTTTTGGGTATTGATGATGAATATGGACCACAGCTTTACAAATGTGACCCAGCTGGTCATTACTTTGGTCACAAGGCCACAAGTGCAGGATTGAAAGACCAAGAGGCAATTAATTTCTTGGAAAAGAAGATGAAGAATGACCCTTCATTTACTTATGAGGAGACAGTTCAGACTGCCATTTCTGCTCTGCAATCTGTTCTTCAGGAGGATTTTAAAGCCACCGAGATTGAGGTTGGAGTGGTGCGGCAGGATAATCCAGAATTCAGAGTTTTAACCACCGAGGAAATTGATGAGCACTTGACTGCAATAAGTGAGCGTGACTGAGTTCTTTACAAGTTTCTAATGCTAGATTAAATTATGTACTTGTTTTCTGGGATCATTGAATTGATTTCCATGTGATATTTGATTAGCAAGTTACCCAAAAATGATGTTAAAGATAATATTTGCTTTCTATTACAAGTCGACTTGGGAGCACACTACCAGTTCTCTGCTTACGCTTAAAAAAAAAGAAAAAGAAATTGGTGTTGGTTACAAAATGAAGACGTATGAGCATATAATGGTGTTGAAAGTCATTGGGCATACGTAGGAATTTGAACTTCGACATAGGATGTTCTGTCTATATTATTAAAAAAATTGAATATTTTATGAAAAATTTGAATATTATATGATGAGCAATTAAGTTTGTATTTGAAGAA 1246 0.4061 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTQKKVPDKLLDQTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRQDNPEFRVLTTEEIDEHLTAISERD 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03922 246 CDD proteasome_alpha_type_6 8 220 IPR034642 GO:0019773
Pste1g03922 246 ProSiteProfiles Proteasome alpha-type subunit profile. 24 239 IPR023332 -
Pste1g03922 246 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 13 241 - -
Pste1g03922 246 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 246 IPR029055 -
Pste1g03922 246 Pfam Proteasome subunit A N-terminal signature 9 31 IPR000426 GO:0006511|GO:0019773
Pste1g03922 246 SMART Proteasome_A_N_2 9 31 IPR000426 GO:0006511|GO:0019773
Pste1g03922 246 ProSitePatterns Proteasome alpha-type subunits signature. 9 31 IPR000426 GO:0006511|GO:0019773
Pste1g03922 246 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 8 245 IPR029055 -
Pste1g03922 246 Pfam Proteasome subunit 36 220 IPR001353 GO:0005839|GO:0051603
Pste1g03922 246 FunFam Proteasome subunit alpha type 1 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03922 Pste-Chr1 20202429 20207686 Transposed