Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03920 AATTGTTGGTCATCCCATGTCCCTCCATCTCTCTCTCTGTCTTAAAATCTTTCTTTCTCTTCTCTTCTATCAGAAACACAACACAATACCTTAACCTCCTCCTCCTCTTCTTCTTGCCACTCATGTTCCAGTTATAGAAACACGCGTGCTTTGCCTCTTTGATTTGTCAAGTGAAATTGATTGGTTCATGCAACGAGGCTGAAATTGAAACAAATTTTCACGCACCCTTCTAGTTCTCGTTGTTTTGGTTAACTTTGTTTTTGAAAATTTTTATTTGTTGCTCCGGTTTGTGGCGGGTTGACCAATAAGGCAGTGTTTGGGGGGTGGTATATCAAAAGGGTGTCTTCACTTTCGCGGCTTTGGGCAATGCAGCGGCGAAACTCGAAGTGGGGTGGTGAATTTTCAATTGGGTCGCGAAATTTGGGGTGAAGTTGATAAATTTCGGTGGTTTTCGTTGGTGGGGTGGTGGGGGTAACTATGGTGTTATCGGCTTCGCCATGTTCTCTGGCGAGAAGCTCGCTGGAGGAGATGCTGGATTCGCTTCGCCGGAGGGACGAGGAAGAAGAGAGGAAGAAGGAATGCCCGCCGGCGTTGCCCGCGAGGCCGGCCTCGCGGGCGCGGCTTCCTCCGGCGCGGCGGTCACTGCCGGTTAACTTTAAGGTTAGCGGCAGCGACATCCTCGCCGCGCCGGAGAATGGACTTAGGACTATTGAGGAGAGGGATTTTGGGCAGAAGAGGAGAAGGGGTGGTTTTGGGAGCATGAGGGTGAAGAAGGATGTGGAGTCTCCTTACGTGGCACGTTCATTTAGTGATTCATCGGGGATGGTTTGGGAATTGGAGGGTGATGATAGCGTTTCTTATTTCATTAAAAAGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGCAGTGGGAACTGGGAACGATACAGTCAACATCAGGAGAGGAAGCATCAGTTTCATTCTCAAATGGAAATGTTATGAAAGTAGTCAGATCAGAGATTCTACCTGCTAATCCTAATGTTTTGGAAGGTGTGGATGATCTTATCAAACTTGGCTATTTGAACGAGCCGTCGAGTAAAGCAGGGCCAATTTTAATTTCCCTCAATCCTTTCAAAGATCTTCAGACGAATGGAAATGATTATGAATCAGCTTATAGGCAGAGAACTTTTGATACTCCTCATGTTTATGCTGTGGCTGATGCAGCTTATAACAAGATGATAAGAGGTGAATGGAATTCTCCCTTTGTCTCTCCTTCTTTGCAATCTGTGTTGTACTTGAATGGGACAATCATAAAGCTTTTCTATTTCTTTTTGTATCTTACAGAGGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGGTCTGGGAAGACAGAAACAGCTAAAATTGCATTGCAATACTTAGCTGCTTTTGGTGGTGATGGAAGTTTTGCGGTAGAAAATGAATTTCTTCAGATAAATCGCATACTAGAAGCTTTTGGGAACGCAAAAACATCTGGGAATAACAACTCTGGTAGATTTGGAAAGTTGATTGAAGTTCACTTCAGCTCCATGGGTAAAATATGTGGGGCAAATATTCAAACCTGTAAGCTTGCTCTAGCTAGATTTGTTACTGCAAATGTGCTTGTTTATGAGCTCCATTTCTGTTGCAATTACTGA 1662 0.4446 MVLSASPCSLARSSLEEMLDSLRRRDEEEERKKECPPALPARPASRARLPPARRSLPVNFKVSGSDILAAPENGLRTIEERDFGQKRRRGGFGSMRVKKDVESPYVARSFSDSSGMVWELEGDDSVSYFIKKKLRVWCRQPRGQWELGTIQSTSGEEASVSFSNGNVMKVVRSEILPANPNVLEGVDDLIKLGYLNEPSSKAGPILISLNPFKDLQTNGNDYESAYRQRTFDTPHVYAVADAAYNKMIRGEWNSPFVSPSLQSVLYLNGTIIKLFYFFLYLTEEVNQSIIISGESGSGKTETAKIALQYLAAFGGDGSFAVENEFLQINRILEAFGNAKTSGNNNSGRFGKLIEVHFSSMGKICGANIQTCKLALARFVTANVLVYELHFCCNY 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03920 394 PANTHER MYOSIN 178 379 - -
Pste1g03920 394 MobiDBLite consensus disorder prediction 17 37 - -
Pste1g03920 394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 380 IPR027417 -
Pste1g03920 394 Pfam Myosin head (motor domain) 282 380 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03920 394 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 131 180 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pste1g03920 394 Gene3D Kinesin motor domain 135 384 IPR036961 -
Pste1g03920 394 MobiDBLite consensus disorder prediction 17 50 - -
Pste1g03920 394 PRINTS Myosin heavy chain signature 199 218 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03920 394 PRINTS Myosin heavy chain signature 330 357 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03920 394 SMART MYSc_2a 178 393 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste1g03920 394 Coils Coil 12 32 - -
Pste1g03920 394 ProSiteProfiles Myosin motor domain profile. 169 394 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03920 Pste-Chr1 20179066 20182167 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03920 1 379 Myosins gene family AT5G54280 49.882 1.57e-116 365
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03920 1 20179066 20182167 Pste1g03920 1 20179066 20182167 ECH