Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03917 GTTGGAGATACGAAAAATCTTTCAAAGCTTTCCCATTGGTTGCTCCAAACACAGTCCCCACCACAAACATGTCACTCTTGGGTTCCTAATCACTCATATCCCTAAGATTTTCTTTCCTTACACATGATGCTACAAGCACACACCCTCTTCCTAGTTTCTACCATCTTCTATTGAACCATTCTTATATAATCTCCTATTTAAACAAATTAAAGGTTTCAAGTTTCAGCTGAAGTATACTTGAAATAAGCCATGGCAGGAACACTAATGGCAGCCACAGCAAGCACTGGCACTGTCCTTAAACCAACACCTTTCCTTGGCCAAAGTAGAGGAACCAATGCCAACCCTCTTAGAGATGTTGTCTGCATGGGAGCTGGCAAATACACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTAAAATACTTGGGACCCTTTTCAGCTCAGACCCCTTCATACTTAACTGGAGAATTCCCTGGGGACTATGGATGGGACACTGCTGGATTGTCTGCTGATCCTGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCTATGCTTGGAGCACTAGGGTGCATCACCCCAGAAGTACTTGAAAAGTGGGTGAGAGTGGACTTCAAGGAGCCAGTTTGGTTCAAAGCAGGAGCACAGATATTCTCAGAAGGTGGCCTAGACTACTTGGGGAGCCCCAACCTTGTGCATGCACAAAGCATCTTGGCAGTGCTAGGATTCCAAGTGGTTCTGATGGGTCTAGTTGAAGGGTTTCGCATCAATGGCCTTCCTGGTGTAGGAGAGGGCAATGACCTCTACCCTGGAGGCCAGTACTTTGACCCTCTTGGCCTTGCTGATGATCTTGTCACCTTTGCTGAGCTCAAGGTTAAGGAGATCAAGAATGGAAGGTTGGCCATGTTCTCCATGTTTGGTTTCTTTGTTCAAGCCATTGTGACTGGGAAAGGACCTCTTGAGAACCTTTTGGATCATCTTGATAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACCAAGTTTGTCCCTGGCTCTTAATTTGGTTTTTCTTTGCTTGGTTTTGTGTGAATGCTATGACTTGGATATATCCTTGTAGATTACTATCACAGTATCTGTCAGATTAGAGAACTTTTCCAGGTTCATTTTAGAACCCTTGTTAATTTAATTAAAGAAACGAATTGGAAGACACAGCAATATTGAATCAAGGAAGAAAGTGACTTGACTTCTAATATGTAACTAGCATGGTTTAAAGATGAACTATCGGT 1286 0.4401 MAGTLMAATASTGTVLKPTPFLGQSRGTNANPLRDVVCMGAGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGSPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDLVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03917 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Pste1g03917 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
Pste1g03917 269 FunFam Chlorophyll a-b binding protein, chloroplastic 58 262 - -
Pste1g03917 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 44 268 IPR001344 GO:0009765|GO:0016020
Pste1g03917 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03917 Pste-Chr1 20157832 20160804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03917 14 268 Chloroplast and Mitochondria Gene Families AT2G05070 67.803 3.14e-121 345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02251 3 15796288 15799169 Pste1g03917 1 20157832 20160804 PCT