Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03914 GTGATAGTGAGACTGTGTTTGCGTTGCGGCAAGACTTGAGAAAGAGAAATTTACCCATATCTTTCTTCCTTTCTTTCCGTGTCTTATAAATTCTTGCGTTTCTTCTTTTTGTTGAAATCGCAGCTCGTTTTCTTCCGCGAAAGGGTTTTCATCGTTTCAGAGAACGAAGATGACAATCGAACCCTTGGATTTGCTCCGCTCCAATCTTTCGCGGGTTCGGATCCCCGAACCGACTAATCGCATCTACAAGCACGAATGCTGCATTTCTTTCGACTCTCCGAGGTCGGAAGGTGGTTTGTTTATCGACATGTGTACTTTTCTTGCTTTCGGGAAGGATTTTGTTGGTTGGAATTATGAGAAGACTGGGAATCCTGTCTATTTGCATATAAAGCAGACAAAGAAGTTAGCTCCAGAAGATAGACCATCAAAGAAACCTACTCTGTTGGCTATAGGTGTTGACGGGGGATTTGATAACAATGATCCTGAATATGAGGAAGCTCATAGTGTAGTTATATTGCCAGACTATGTTTCTCTTCCATTCCCTTCTGTGGAATTACCCGAGAAGGTAAGGTTGGCAGTTGATGCAATCTTACTAGCTGAGGATGCTGAACGGAAGGAGCAACTTGCAGCTTGGACTGCTGATAAAAAACAAGTTAGTTCCTATGCAATGAATTTACAACAGATTGACAATGGTGTTGTTATTCTGCCATCCGGGTGGAAATGTGCTAAATGTGACAAGAAAGACAATCTTTGGCTAAACCTCACTGATGGAATGATTCTTTGTGGGAGGAAAAACTGGGATGGAACAGGTGGAAACAACCATGCTGTTGAGCATTTCCAAGAGACAGGCTATCCTCTTGCTGTAAAGCTGGGGACTATCACTGCTGATCTCGAAGCAGCAGATGTTTTCTCTTATCCAGAGGATGAAGGTGTCTTGGATCCACAATTGGCACAACATCTGGCGTTTTTTGGCATTGACTTTTCATCGCTACAAAAGACTGAAATGACAACTGCTGAAAGAGAACTTGATCAAAATACAAATTTTGATTGGAATCGAATCCAAGAAAGTGGGCAAGAAGTAGATCCAATTTTTGGACCTGGATATACAGGATTGGTGAATATTGGAAACAGTTGTTACATGGCGGCAACTATGCAAGTTGTGTTTTCAACAAGATCTTTCATATCACGGTACTACATTAACCAAAGTCTAAAGAAGGCATTTGAGATATCTCCTGCTGATCCCACTGTAGACCTAAATATGCAGTTGACAAAATTGGCTCATGGTATGCTTTCTGGTAAATATTCTGTTCTGGCATTTGAGAATGATGAAAAAGAAATCTCTGCTACTTCAACTACAACTGCTATACAAGAAGGGATACGTCCACGTATGTTCAAATCTGTAATAGCGGCCAGCCATCCTGAATTTTCATCTACGCGGCAACAGGATGCTTTAGAATTTTTCCTACATTTTCTTGATCAAGTTGAACGAGCTAATTCTGGGAAAACTGAACTGGATCCATCAAGGAGTTTCAAATTTGGTATTGAAGATAGAATTTTGTGTTCATCTGGAAAAGTTACATATAATAGAAGGCATGACTACATTCTTTCTCTCAATATCCCATTACGTGAAGCAACTAACAAAGAACAATTGGAATCCTTTAACAAACTGAAAGCAGAGAAACTTGCTGAAGGAAAGGAAATAAATGCCAATGAGATTGTCCGTCCAAGGGTGCCTTTGGAAACTTGCCTTGCGAACTTCTCAGCTCCTGAGGAGATACATGATTTTTACAGTACTGCTTTGAAGACAAAGACAACAGCACTGAAAGTATTTGAAAACAATCTTGATGCTGAAACAACATTCCGTAGGACTGCAGGTCTGACCTCATTTCCTGATTACCTGGTGTTACATATGCGGAGATTTGTTATGGAGGCAGGATGGGTACCCAAAAAGCTTGATGTGTATATTGATGTTCCTGATATCATAGATATCAGTCACATGCGCAGCAAGGGTCACCAGTCTGGGGAAGAGCTTTTACCTGATGTTGTACCTGAGGAGGAAGATTCAAACAAAAGTTGGGTTAATGAAGAAATTGTTGCTCAGCTAGTTTCCATGGGCTTTAACCATCTCCATTGTCAGAAAGCTGCTATAAATACATCAAATGTTGGAGTAGAAGAGGCAATGAATTGGTTACTATCTCACATGGATGATCCAGACATTGACAATCCTATTTCCAAAGGCTATAGCTCTGAAACTTCAATTGACCAATCAAAAGTTGACACTCTAATTTCATTTGGATTCCAAGAAGAAATAGCTAGAAAGGCTCTGAAGGCATCGGGTGGTGACATTGAGAAAGCAACAGATTGGATATTTAACAATCCCGATGCATCAGTCTCTAGTATGGATGCTACCACATCAAACACTGCATCCACTACCAATGACGTTAACCCACCTGATGGAGGAGGGAAATATCGACTTGTTGGAATTGTGAGCCACAGTGGAACCTCTACGCAGTGTGGTCACTATGTTGCTCACATTTTAAAAGATGGTAGATGGGCAATTTTCAACGACAACAAGGTTGGAGTTTCCGTTAATCCTCCAAAGGAAATGGGCTATCTTTATTTCTTCGAGAGGCTTTGATTGGATATACAGTGTTAGGCGTTGAACAAGGTGAATATTTCAACCATTAAGAGGCACGTGTCGTTTTTGAATGGCATTATCAATTATCATACCATCTACTTCTGCTGACGTGATATTATTTGCTACTCTTGTCTTGGTGGCATGATAAACATTCCTCTAGTTGGCTGAATCGTCTTTTCTTGGTTCTCAGCAGTAATGAAGCATTTTGGAACTTAACATTTCATTCATCTTCTATAAATTGCATGTTTAGGAGTCCGAGTAACAATGGAGCGACGAATGGTCAGTTAGTTCTAGGAATTCAAATAACAATACAACGAATCATCAGTTCTAGTGAATGTTTATACAGCTCCATTTTTCTGATGTCTAAAACCGGTTTCTTTGAAATGGCACTTTCTTATTGCACCTCATAAAAATCTTATGTGACATTCCTTTATCCACTTATTTCGCAGTGTAAAGGAGATGTCACATGAGATATATCATAGGGATAGAGGAAGAAACAACCTTTGAAATGTTGTTTGTTATAACTTCTGTTCGTTCTTGCCCTTTTTAACAGAAAAATCACATTCTTATATTGG 3213 0.3984 MTIEPLDLLRSNLSRVRIPEPTNRIYKHECCISFDSPRSEGGLFIDMCTFLAFGKDFVGWNYEKTGNPVYLHIKQTKKLAPEDRPSKKPTLLAIGVDGGFDNNDPEYEEAHSVVILPDYVSLPFPSVELPEKVRLAVDAILLAEDAERKEQLAAWTADKKQVSSYAMNLQQIDNGVVILPSGWKCAKCDKKDNLWLNLTDGMILCGRKNWDGTGGNNHAVEHFQETGYPLAVKLGTITADLEAADVFSYPEDEGVLDPQLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQEVDPIFGPGYTGLVNIGNSCYMAATMQVVFSTRSFISRYYINQSLKKAFEISPADPTVDLNMQLTKLAHGMLSGKYSVLAFENDEKEISATSTTTAIQEGIRPRMFKSVIAASHPEFSSTRQQDALEFFLHFLDQVERANSGKTELDPSRSFKFGIEDRILCSSGKVTYNRRHDYILSLNIPLREATNKEQLESFNKLKAEKLAEGKEINANEIVRPRVPLETCLANFSAPEEIHDFYSTALKTKTTALKVFENNLDAETTFRRTAGLTSFPDYLVLHMRRFVMEAGWVPKKLDVYIDVPDIIDISHMRSKGHQSGEELLPDVVPEEEDSNKSWVNEEIVAQLVSMGFNHLHCQKAAINTSNVGVEEAMNWLLSHMDDPDIDNPISKGYSSETSIDQSKVDTLISFGFQEEIARKALKASGGDIEKATDWIFNNPDASVSSMDATTSNTASTTNDVNPPDGGGKYRLVGIVSHSGTSTQCGHYVAHILKDGRWAIFNDNKVGVSVNPPKEMGYLYFFERL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03914 822 Pfam UBA/TS-N domain 638 674 IPR015940 -
Pste1g03914 822 Pfam UBA/TS-N domain 697 733 IPR015940 -
Pste1g03914 822 Gene3D Cysteine proteinases 306 822 - -
Pste1g03914 822 CDD Peptidase_C19B 314 820 - -
Pste1g03914 822 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 258 IPR013083 -
Pste1g03914 822 Pfam Variant UBP zinc finger 16 78 IPR041432 -
Pste1g03914 822 Gene3D - 692 753 - -
Pste1g03914 822 FunFam Ubiquitin carboxyl-terminal hydrolase 678 741 - -
Pste1g03914 822 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 137 821 - -
Pste1g03914 822 FunFam Ubiquitin carboxyl-terminal hydrolase 6 103 - -
Pste1g03914 822 PIRSF UBP 8 822 IPR016652 GO:0004843|GO:0016579
Pste1g03914 822 CDD UBA1_atUBP14 638 682 - -
Pste1g03914 822 ProSiteProfiles Zinc finger UBP-type profile. 161 271 IPR001607 GO:0008270
Pste1g03914 822 CDD UBA2_atUBP14 700 737 - -
Pste1g03914 822 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 113 IPR013083 -
Pste1g03914 822 Gene3D - 619 691 - -
Pste1g03914 822 SMART uba_6 638 676 IPR015940 -
Pste1g03914 822 SMART uba_6 698 735 IPR015940 -
Pste1g03914 822 FunFam Ubiquitin carboxyl-terminal hydrolase 306 657 - -
Pste1g03914 822 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 767 785 IPR018200 GO:0004843|GO:0006511
Pste1g03914 822 SMART Zf_UBP_1 184 239 IPR001607 GO:0008270
Pste1g03914 822 Pfam Ubiquitin carboxyl-terminal hydrolase 313 819 IPR001394 GO:0004843|GO:0016579
Pste1g03914 822 SUPERFAMILY RING/U-box 163 271 - -
Pste1g03914 822 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 314 329 IPR018200 GO:0004843|GO:0006511
Pste1g03914 822 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 313 822 IPR028889 -
Pste1g03914 822 Pfam Zn-finger in ubiquitin-hydrolases and other protein 185 259 IPR001607 GO:0008270
Pste1g03914 822 SUPERFAMILY UBA-like 693 738 IPR009060 GO:0005515
Pste1g03914 822 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 696 736 IPR015940 -
Pste1g03914 822 FunFam Ubiquitin carboxyl-terminal hydrolase 149 258 - -
Pste1g03914 822 FunFam Ubiquitin carboxyl-terminal hydrolase 636 677 - -
Pste1g03914 822 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 636 677 IPR015940 -
Pste1g03914 822 SUPERFAMILY Cysteine proteinases 309 821 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03914 Pste-Chr1 20104356 20115474 Dispersed/Wgd