Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03201 TGTGTGTCTAGTTTCGCCAACTCCAAAGTGAGTGTCCTTTTCCTTTTCAATTCGTTCCTCTCTTCAGTTTCTTTCTTTCACTGCTTCACCGTTATCCTCTTCGGCTTTGGCCAAATCATGTTGGCCTCCACACTCCTTACGCCATCGAAGCTCAACCCTTCGCATTTCGTTCCACCCGCCACCGTCGTCGTCGCAGAAACTTTCCCGAGAAACAGAGCGATTATCTCTTTCAAATCCAACTCCAAACTCGTTTTCGCTGCCAGGGCCACTGGTAACGCCCGTGACGGCGCCATCGACGCTACCTCTCCCACTGGCATTGATGCAGTAACAAGTACATCTTCTGGCCTTGGTGATGGTTATGTGGCCTTGTTTATTCGTATGTTAGGCCTTGATCGTGATCCTCAGGATAGAGAACAAGCTGTAATTGCTCTTTGGAAGTATTCACTTGGAGGAAAGAAATGTATAGACACTATAATGCAGTTTCCTGGCTGTATTAATCTTGTTGTGAACCTCCTCAGATCAGAGTCAAGTTCAGCATGTGAGGCAGCTGCAGGCCTTCTGCGATCACTATCTTCAGTTAATCTGTATAGAAATTCTGTTGCTGATAGTGGAGCAATAGAAGAGATAGGCAGATTGCTGAGGAAAAATTCATTGGCTCCTGAGGTAAAGGAGCAGAGTTTGAGTACACTGTGGAATTTATCTGTTGATGAGAAGCTCTGCATTAAAATTTCAAACACTGAGATTCTGCCATTAGCTATTAAGTACCTTGGCGATGAGGATATAAAAGTGAAGGAGGCTGCAGGGGGCATTTTGGCAAATTTAGCATTGAGCCGTGTTAACCACAACATCATGGTTGAAGCAGGAGTTATACCAAAATTGGCGAAGTTTTTAACGTCTAATCTGGAAGGATCTAAAGTTATTAGGAAGGAAGCAAGGAATGTATTGCTTGAACTTGTAAAGGACAAGTATTATAGAATTCTTGTTATTGAGGAAGGTCTAATCCCTGTGCCATTAATTGGTGCTTCAGCCTTTAAGTCATTCGTCCCTGGCTTGCATTTGTGGCCGACATTACCTGATGGTACAGAAATTGAAAGGACTTCTAGATCGCCATCCAGATATGGTGCTTCGGAATTACTTATTGGATTAAATATTGATGACAAGAATGCTAACTTAGAGGAAGCAAAAGTCAATGCAATTGTTGGACGAACACAACAGCATTTCCTTGCTCGTGTTGGGGCTTTAGAAATGGAAGAAAAGACTGTACCTCATTCTGAATGCTCAAATGATCAGAGGATTACACTTTTACCTTGGATAGATGGTGTTGCTCGTTTAGTACTGATACTAGAACTGGAAGATAAGTCTGCAATAAGAAAGGCTGCTGAATCAATTGCTGCTGCATGTATCAATGAACATATGCGTATTGCATTCAGGGAGGCTGGAGCAATTAAGCATTTAGTAAGGCTTTTGAATTGTGATGATAATGCAGTGCGGTTGGCAGCAGCACAAGCTTTGGAAAGGCTGTCTGTTAGCAAAATTGTTTGCCGGGTGATTGAAGCTGAGGGGGTTTTAGGTCCTTTAGTTAATATTTTGAAATGCTCAGAGATAGCTGGAACTATTGTGGAAAAGTGCTTGAACATACTAGCTCGGATGTTAGATCCCAGTAAAGAGATGCAATTGAAGTTTTATGATGGAGCAGTTAATGAATCTGAAAAGACATATGTTGTTTCGACCAGGATTAGTAGCACTGAACAAGACGTATCAAAATTGTATGCAAGGAATGATATACTAGATTCTGTTTTCATAGCACATCTTGTTGAAATTCTGAAGTCCTCTCCTCCCAGTTTACAAGAAAAAGCCGCGTCTGTGCTTGATTATGTGGCATTGACTGATCCAACTCTGGCCCCAATTATATCTTTTGATATTGAATCTGCGGACATGGAATCTAACGTAGAATCTCAGTTCTCTGAAGCATATGCAATTGAATTTGAAGAAGCTGGTCTTGCCATATCTGCAGCATCCCGGTTGTTGACAAGACTACTCGATTGTGAGAATTTTCGCCACAAAATAAATTCCTCCCATTTCATTGATTTGCTTCGCGGAATCCTCAGGTCCAATATTCCCCTCCACAACAAAGATTGGGTAGCTGCTTGCCTAGTTAAACTAAGTTCTTTCTCTGGCTCCATCACGAGTCTCTATCCTATCAATGTGGAAGTTACAATTTATGAGACTATCCCAAGACTTCTAGAACAGATCAAAACTTCATTCTCCCCAGAAGCACAGGAAAAAGCTGTTGCAGAACTAAATAGAATAATATCTGAAGGAGTGATAGATTCCACAGAAGCTATTATTTCTGATGAAGCAATATATTCATTGGTGAAATTGATTGAAGAAGGCAGTGATAGGGCTGTTGAGTCAAGCTTGGCAATACTGTATAATCTGAGTATGGACAGTGAGAACCATCCTGCACTTGTGGCAGCAGGAGCCGTACAGGTCTTAAAAAGAATTGTTCTATCAAACAGACCACACTGGGAGCGGGCACTTCTTTTACTCAGGATTTTGCAACCGTGACGAGTTCAAGAGTGCAAATCTTGAAAGTTTCCTCAATGTATAATCTACTTTAAATGTGTACAAGAAAATCTTAACCTTTATAGATAAAACATTAGTCTGAGTTTTGCTATCTTAAACTTTTTGGCAGGTAATGCATGAAGTTGTTTTTACTTTTAAAAA 2727 0.4096 CVSSFANSKVSVLFLFNSFLSSVSFFHCFTVILFGFGQIMLASTLLTPSKLNPSHFVPPATVVVAETFPRNRAIISFKSNSKLVFAARATGNARDGAIDATSPTGIDAVTSTSSGLGDGYVALFIRMLGLDRDPQDREQAVIALWKYSLGGKKCIDTIMQFPGCINLVVNLLRSESSSACEAAAGLLRSLSSVNLYRNSVADSGAIEEIGRLLRKNSLAPEVKEQSLSTLWNLSVDEKLCIKISNTEILPLAIKYLGDEDIKVKEAAGGILANLALSRVNHNIMVEAGVIPKLAKFLTSNLEGSKVIRKEARNVLLELVKDKYYRILVIEEGLIPVPLIGASAFKSFVPGLHLWPTLPDGTEIERTSRSPSRYGASELLIGLNIDDKNANLEEAKVNAIVGRTQQHFLARVGALEMEEKTVPHSECSNDQRITLLPWIDGVARLVLILELEDKSAIRKAAESIAAACINEHMRIAFREAGAIKHLVRLLNCDDNAVRLAAAQALERLSVSKIVCRVIEAEGVLGPLVNILKCSEIAGTIVEKCLNILARMLDPSKEMQLKFYDGAVNESEKTYVVSTRISSTEQDVSKLYARNDILDSVFIAHLVEILKSSPPSLQEKAASVLDYVALTDPTLAPIISFDIESADMESNVESQFSEAYAIEFEEAGLAISAASRLLTRLLDCENFRHKINSSHFIDLLRGILRSNIPLHNKDWVAACLVKLSSFSGSITSLYPINVEVTIYETIPRLLEQIKTSFSPEAQEKAVAELNRIISEGVIDSTEAIISDEAIYSLVKLIEEGSDRAVESSLAILYNLSMDSENHPALVAAGAVQVLKRIVLSNRPHWERALLLLRILQP 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03201 855 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 80 854 - -
Pste1g03201 855 Gene3D - 663 853 IPR011989 -
Pste1g03201 855 Gene3D - 425 640 IPR011989 -
Pste1g03201 855 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 786 828 IPR000225 GO:0005515
Pste1g03201 855 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 204 237 IPR000225 GO:0005515
Pste1g03201 855 SUPERFAMILY ARM repeat 671 840 IPR016024 -
Pste1g03201 855 Gene3D - 117 343 IPR011989 -
Pste1g03201 855 SUPERFAMILY ARM repeat 440 719 IPR016024 -
Pste1g03201 855 Pfam Armadillo/beta-catenin-like repeat 200 234 IPR000225 GO:0005515
Pste1g03201 855 Pfam Armadillo/beta-catenin-like repeat 469 508 IPR000225 GO:0005515
Pste1g03201 855 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 163 205 IPR000225 GO:0005515
Pste1g03201 855 SMART arm_5 236 276 IPR000225 GO:0005515
Pste1g03201 855 SMART arm_5 151 192 IPR000225 GO:0005515
Pste1g03201 855 SMART arm_5 277 320 IPR000225 GO:0005515
Pste1g03201 855 SMART arm_5 587 628 IPR000225 GO:0005515
Pste1g03201 855 SMART arm_5 469 509 IPR000225 GO:0005515
Pste1g03201 855 SMART arm_5 193 235 IPR000225 GO:0005515
Pste1g03201 855 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 480 508 IPR000225 GO:0005515
Pste1g03201 855 SUPERFAMILY ARM repeat 123 340 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03201 119 342 U-box Gene Family AT2G23140 28.632 4.10e-07 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03201 1 14546502 14555008 Pste1g03201 1 14546502 14555008 ECH