Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02979 GTGTCTTTGCAAAGTTCTGGAATCAACCCCGCAAGGTCCCCCACTCCTTCAAAATCCTCTCTTTTATCTCACACTCTAATCATAGTCCTTCCCATCATCATCATCCTCATCAACCACCACCTCCTCCCTCCCCTCAGTAACACCTAACAACATAACATTCAGAGCAAAACAAAACTATCATACCCACATGGATTTAGTTAACACCTTACACCTGTCTGTCTTCTTCTGTGCCCTTCTCTTTTTATATGTTCTTATTATTTTATTATATATACACACATATATATTTTTCTTTTTTATGTTCTATGTCTCACTTTAACTTTCTTTCTATTTGTTGGATGAATATGAAGCAATGAAAGTGCCACACTCTAATTATGCGAACGCTTTGTGATGCTTGTGAGAGCGCCGCGGCTATAGTTTTCTGCGCCGCGGATGAGGCTGCACTTTGCCGTGCCTGTGATGAGAAGGTTCACATGTGCAATAAGCTTGCTAGTAGGCATGTGAGAGTTGGTCTTGCGAGTCCAAGTGATGTGCCACGATGTGACATATGCGAGAATGCCCCCGCTTTCTTCTATTGCGAGACAGATGGAAGCTCCCTCTGTTTGCAGTGTGATATGATAGTTCATGTTGGAGGTAAAAGAACGCATGGAAGATATCTTCTGTTCAGGCAAAGAGTTGAGTTTCCAGGAGACAAATCTATTCACGCTGAAAATCCGGCTTCACAACCATTGGAACCAGGTGAAACTAAAAGAGGACAAAATCCACTGCCCAAACTAAAAACGGGAGAGAAGCAACAAAATCACAGAATGCCTCTGGTTCCCTCGCCAGGACCCGATGCTGATGGGCATACCAAGATGGAAACTAAAATGATTGATTTGAACATGAAGCCGAATAGAATACATGAACAAGCATCAAATAATCAGGTTAGAGAGCGTGGGAGATTACTTTTGTCTGCCTAGTTAGAATTTTCTTTTCTGGTAAAGGTCTGTTTCACATAAGTGGGACAGTGCATATGCAAACTGAAATTATTAACCATATTAGTACAAATCCAGCTCAATAAAACACGGAACATTTCTTCTTAGTTCTTAGTGCTTTTAAATCCATCCATCGTGCATTAAATATAGAAAACTTGTTCAAATAGATTTTTGATTGGGATATGCCAATGGGACTGGTTGAAATGTCATGTGATGTAATTGTCAAATTACTTTATGTCTTGTGGGATCAAATGTCCAGCTTTACTTGAAGGAACATCTTCTGTCCAGCTCAATAAAACACGGAACATTTCTTCTTAGTTCTTAGTGCTTTTAAATCCATCCATCGTGCATTAAATATAGAAAACTTGTTCAAATAGTTTTTTGATTGGGATATGCCAATGGGACTGGTTGAAATGTCATGTGATGTAATTGTCAAATTACTTTATGTCTTGTGGGATCAAATGTCCAGCTTTACTTGAAGGAACATCTTCTGGTCCCGTGCTAGTAATTGCCCTTTACAGCTTAACATTACTAGGCCAATATTGATTTGTACTTGTAAATTGTAAATTGTGGGTTTGAAAATTCTTACATCACCTTAAATAATATGAAATTTATTTTGAACTTTTAGATATTGCTTCCTTCTGAAGCAGGTATTCAGTAAATTCTGATAAAACTTAAACTACATGTGGTTGAACAGTTGATCTGAACAATGAACACCCCCTCCCCCTTTTTCACTCAACTTCAATACCATATCGTTCCTCTTTCCATCTTCAGTGCAGTCATCTAATGGCTGGATGAAAGTAGAACATTTGTAAGTTGTAACATTTGTACAAAACACATCCTTGTTATGGTATGCAATGCAGTGAAATATATAATTCTCAGGAATTTGCTTTTCTTTGCAGCCATAAATGGTGTAACTAACAGGTTCCTACACCAAAACTCTATCGATGGCGAAAGCTTCTTTTTGTTCTCATGCATGCTAGTCACAAGGATTACATACTCTGTTAACATCCTATTCTGGCAAATGAGGCACCAAAATCTTGAGGAATGTGTTCGCCTATGTAGGAATTTAATTTGGTAGTTCAACACATCATATCTGTACTGCAAAGCATTGTTAACTGTATATCTATGATTCCTTTGAATGAATTGTGTGTTGACTGTTGACTTTTTTGTTTTGGTATCAGTTTTGTATGCCATTACATCCCCTAGAAATTCACGGGGAAAAGGTCTATTTTTTATTCGAATAATATCCTACTATTAGTCAACACACATCAGGTTGAAATTATTGCTTCTTTCTGAGGCCAAGAATTATCGATCATAAGGTATTAGCAAATTGGTTGGAC 2314 0.3781 MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPRCDICENAPAFFYCETDGSSLCLQCDMIVHVGGKRTHGRYLLFRQRVEFPGDKSIHAENPASQPLEPGETKRGQNPLPKLKTGEKQQNHRMPLVPSPGPDADGHTKMETKMIDLNMKPNRIHEQASNNQVRERGRLLLSA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02979 194 SMART bboxneu5 51 96 IPR000315 GO:0008270
Pste1g02979 194 SMART bboxneu5 1 47 IPR000315 GO:0008270
Pste1g02979 194 MobiDBLite consensus disorder prediction 174 188 - -
Pste1g02979 194 SUPERFAMILY B-box zinc-binding domain 48 86 - -
Pste1g02979 194 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Pste1g02979 194 MobiDBLite consensus disorder prediction 157 171 - -
Pste1g02979 194 FunFam B-box zinc finger protein 19 2 92 - -
Pste1g02979 194 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pste1g02979 194 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Pste1g02979 194 Pfam B-box zinc finger 52 90 IPR000315 GO:0008270
Pste1g02979 194 CDD Bbox1_BBX-like 56 96 - -
Pste1g02979 194 MobiDBLite consensus disorder prediction 107 194 - -
Pste1g02979 194 CDD Bbox1_BBX-like 4 47 - -
Pste1g02979 194 Gene3D Classic Zinc Finger 2 91 - -
Pste1g02979 194 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02979 Pste-Chr1 13077827 13080952 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Pste1g02979 zf-B_box 2.1e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02979 1 13077827 13080952 Pste1g02979 1 13077827 13080952 ECH
Pste1g01672 1 5148079 5149115 Pste1g02979 1 13077827 13080952 ECH