Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02917 ATGGCGGGTTTATTCTCACTAGGAGGGAGAGGGAACAGCAACAGCCAAGAGGAAATCCCTCCTCCAGAAACCTTATACTGGTATAATAACAAGAATGACGACGTTTCCTCTTACCACAGAACTGGCGGCTTTGAGCTATGGAACCAGCAACAGCTCATGGGCCAGGGCCCTTCCCAAGCTCAAGCTCAAGCTCAAGCTCAAGCTCAAGCTCGGCCTCTCTTTCACCAAGATCTCTACTCCGCACTGGGGGTTGGCCCCACCAGGCCCATCTCGGATGATCACTCCTCCTCGAGATCCGGGGGCTTCATGCTCGGAGGAGGAACCAGCGGAAGCGGTGGGATTAGCTGTCAGGACTGTGGAAACCAAGCCAAAAAGGATTGCCCTCACATGCGGTGCAGGACCTGCTGCAAGAGCCGCGGCTTCGACTGCCAAACCCATATCAAGAGCACTTGGGTTCCCGCTTCACGACGACGCGAACGACAACAACAACTCTCCTCTTTGCAGCAACCAAACATCCAAGCTTCTGGAGACCTTCCCAAAAGGCAGAGAGATCATAATAACCCTTCTTCCTCTTCTCCTCTCGCCTGCACCCGCTTGCCTTCAAACCCCTCTCCTTCAGGGTTAGAAGAGGGGAATTTCCCGGCTATGGTGAGGTCCGCTGCGGAGTTCAGATGTGTACGTGTGAGCTCCATGGACGAAGATGCAGAAGAGGAGTATGCTTACTCAACAGCTGTGAACATTGGAGGGCATGTGTTCAAAGGGATCTTATATGATTATGGTCCAGAGGGTAATACTAGCTACATGGGTGGTGCTGGTGAAAGCTCCTCCATGGGGTTTTCTGGGTTGAACCTCACTGCTGGTCCCATGGTTTCTGAACCACTTGTTGATCCTTCTTCATCCTTGTATCCTACTCCTCTTAACACTTTCATGCCTGGTAGCGGTACGCAATTCTTCCCTCACCCACGATCTTGAACAAACAAAAGCTATCCAAAACAAAGCAAACAAACAGAATTTTTATTTTGTTTTTATGGTTTAATTTACTGCAACCTCCCTCCCCAACCTTCTCTTTCCACTATTTTATGATGTTGTAGTAGTAAATCTCATACGCATTCAAGTAGGAGAGAATGGAAGGAAAAAAGAAAGAAAGAAAAAAAGAAAAGAGAAAATGCAGACATGCCATGTTTTGTTTTTTATGCAAATGCAAATTATCAATGCCTATTTAGTTTCAAAATGTATCATTC 1241 0.477 MAGLFSLGGRGNSNSQEEIPPPETLYWYNNKNDDVSSYHRTGGFELWNQQQLMGQGPSQAQAQAQAQAQARPLFHQDLYSALGVGPTRPISDDHSSSRSGGFMLGGGTSGSGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHIKSTWVPASRRRERQQQLSSLQQPNIQASGDLPKRQRDHNNPSSSSPLACTRLPSNPSPSGLEEGNFPAMVRSAAEFRCVRVSSMDEDAEEEYAYSTAVNIGGHVFKGILYDYGPEGNTSYMGGAGESSSMGFSGLNLTAGPMVSEPLVDPSSSLYPTPLNTFMPGSGTQFFPHPRS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02917 323 MobiDBLite consensus disorder prediction 153 212 - -
Pste1g02917 323 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 307 IPR007818 GO:0003700|GO:0006355
Pste1g02917 323 MobiDBLite consensus disorder prediction 153 176 - -
Pste1g02917 323 NCBIfam putative zinc finger domain, LRP1 type 115 157 IPR006510 -
Pste1g02917 323 MobiDBLite consensus disorder prediction 1 27 - -
Pste1g02917 323 MobiDBLite consensus disorder prediction 185 208 - -
Pste1g02917 323 MobiDBLite consensus disorder prediction 84 106 - -
Pste1g02917 323 MobiDBLite consensus disorder prediction 90 106 - -
Pste1g02917 323 NCBIfam LRP1 C-terminal domain 213 261 IPR006511 -
Pste1g02917 323 Pfam Domain of unknown function (DUF702) 113 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02917 Pste-Chr1 12552095 12553952 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pste1g02917 DUF702 5.9e-63 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00764 2 8038296 8039960 Pste1g02917 1 12552095 12553952 ECH
Pste1g01696 1 5219212 5220170 Pste1g02917 1 12552095 12553952 ECH
Pste1g02917 1 12552095 12553952 Pste1g02917 1 12552095 12553952 ECH