Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02897 GAGGCCTTGGGAAATTTTATATTTTATATAAAAAGGTAAGATCCAAGAATGAATTCCAAACCCTAATCATAATCTCATTCAAACCCCATCAGTCCATTTGGAACTTGAATTAGATCACATTAGAGGCTTCAAACAAGGGTTCCCAAAACCCAGAAACCCTATTCCGATTCCTTTGCGATTATGGCGTCTGAGAGCGCTTCTCGATCGAGTTCCGCGGCTGATTCTTACATTGGGAGTTTGATAAGCTTGACATCGAAGAGTGAGATAAGATACGAGGGCATTCTTTACAACATCAACACCGAAGAGTCCAGTATTGGCCTCAGAAATGTGCGATCCTTTGGAACAGAAGGAAGGAAAAAGGATGGCCCACAAATTCCTCCCGGTGACAAGGTTTATGAGTACATACTTTTCCGTGGGACTGACATCAAGGATTTACAGGTTAAATCCTCCCCACCTGTCCAGCCTGCTCCACAAGTTAACAATGACCCAGCTATTATTCAGTCTCACTACCCCCGTCCGGTCACCACCACATCTACGAGTTTGCCTTCTGCCGCAAGTGGGTCTTTGACTGATCTTGGCTCTCACACCACACAGCTTGGACTTCCTGGGTCAAATTTTCAAGGGCCCTTGCCTTTGTATCAACCTGGAGGGAATATAGGATCTTGGGGAGCTTCTCCACCTGCTCCAAATGCAAATGGTGGTAGGCTAGCTATGCCTATGTATTGGCAAGGATATTATGGTGCCCCAAATGGGCTTCCTCATTTACACCAACAATCTTTGCTTCAACCGCCACCTGGTTTAACAATGCCATCATCTATGCAGCCACCAATGCAGTATCCTAATTTTAGTCCATCTTTACCTACTGTATCTTCTAATTTGCCAGAATTGCCATCATCTTTGCTACCGGTTGGTACGAGTACTCCTAGTGTAATATCTACTTCCTTGCCCCCATCTAATTTGATTCCAACACCTTCTGCTTTGCCCCCTGCACCTTCAGCTCTATCTCCTGCACCATCTGCTTTAACTCCTGCATCTTCTGCACCTTCTGCAACACTTGCTTCTGAAATGTTGCCAGTATCAGTAACAAACAAAGCACCCAATGTTTCAACTTCAGCAGCTATGTTTGCTGCTAACTTACCACTGACTTCGCTGACCAATTCTGTTCCGGATATAAATATAGTGCCACCAATCTCCAGCAAAGTGAATGCAATTTCAGGTTCAAGCTTGCCCTATCAAACTGTATCCCAGTTGTCTCCTGCGATTGTTGGGTCATCAAGTTCTACCAATACAGAAACATCAGCACCTTCTCTGGTAACCCCAGGTCAATTATTGCAGTCTGGACCAACTAAAGTTTCTTCAGGTCTGCCTTCACAAGCACATCATAAGGATGTTGAAGTAGTTCAGGTATCATCAACATCATCTCCTGAGCCTTCCGTGCCAGTTTCTGCTGAAACTCAACCACCAATACTTCCATTGCCTGTAACTTCACGGTCCAGTCACCGGCCCGGTGGAGCTCCTATCCAAACTCACCATGGCTACAATAGTTACAGAGGACATGGAAGAGGAAGAGGAGCTGGGGGTTTGCGTCCAGTTACCAAATTCACTGAAGATTTTGATTTCATGGCTATGAATGAGAAGTTCAAGAAAGATGAAGTATGGGGTCATCTTGGTAAAAGTAAGTCTCATTCAAAAGATAAAGAAGGGGAAGAAAATTCCTTCGAAGAAGATTACCAAGATGAAGACAACGAAGATTTGTCAAATTTTGAGGTTAAGCCTATTTATAACAAGGATGATTTCTTTGACTCGCTCTCTTCCAATGTGCATGATAATGGTTCACAGAACGGAAGGACCAGATACTCTGAACAAATCAAGATTGATACTGAGACGTTTGGTGATTTTGTGAGGCACCGTGGAGGTCGTGGGGGCCGTGGTCCTGGCCGTGGTGGACGTGGCCGAGGTGGTTATTATGGAAGAGGAGGGTATGGCTATTCTGGACGAGGGAGGGGACGCAGTATGTCAGGTCATCCTTTGTAGGTGACAGTTAATGTTTAGTTATGGACATGTTGGAGAAAATGATCCTAGGTAGCTTCCTAGGAAAGCACCATAATTATGTTTTGTCGTTATGTTGCTTGTTTCGCAGAATAAGTAGGATATTTATTTTTTGTCATGATACCCTCTTGTTACACTTCTGCCAAGTTCATTTGGTTTGGTGGAAAGATGTTTGTAAACTATTTTATTTAAGCTTTTATATATGAACAAGGCAGAACTTTACACTAATATATAAGCTGGATTATTGATTATGCATAAACGTTATTAAGC 2319 0.4338 MASESASRSSSAADSYIGSLISLTSKSEIRYEGILYNINTEESSIGLRNVRSFGTEGRKKDGPQIPPGDKVYEYILFRGTDIKDLQVKSSPPVQPAPQVNNDPAIIQSHYPRPVTTTSTSLPSAASGSLTDLGSHTTQLGLPGSNFQGPLPLYQPGGNIGSWGASPPAPNANGGRLAMPMYWQGYYGAPNGLPHLHQQSLLQPPPGLTMPSSMQPPMQYPNFSPSLPTVSSNLPELPSSLLPVGTSTPSVISTSLPPSNLIPTPSALPPAPSALSPAPSALTPASSAPSATLASEMLPVSVTNKAPNVSTSAAMFAANLPLTSLTNSVPDINIVPPISSKVNAISGSSLPYQTVSQLSPAIVGSSSSTNTETSAPSLVTPGQLLQSGPTKVSSGLPSQAHHKDVEVVQVSSTSSPEPSVPVSAETQPPILPLPVTSRSSHRPGGAPIQTHHGYNSYRGHGRGRGAGGLRPVTKFTEDFDFMAMNEKFKKDEVWGHLGKSKSHSKDKEGEENSFEEDYQDEDNEDLSNFEVKPIYNKDDFFDSLSSNVHDNGSQNGRTRYSEQIKIDTETFGDFVRHRGGRGGRGPGRGGRGRGGYYGRGGYGYSGRGRGRSMSGHPL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02897 617 PANTHER SCD6 PROTEIN-RELATED 11 279 - -
Pste1g02897 617 MobiDBLite consensus disorder prediction 361 396 - -
Pste1g02897 617 MobiDBLite consensus disorder prediction 495 523 - -
Pste1g02897 617 CDD LSm14_N 16 87 IPR025609 -
Pste1g02897 617 MobiDBLite consensus disorder prediction 262 276 - -
Pste1g02897 617 MobiDBLite consensus disorder prediction 573 617 - -
Pste1g02897 617 MobiDBLite consensus disorder prediction 361 469 - -
Pste1g02897 617 MobiDBLite consensus disorder prediction 262 286 - -
Pste1g02897 617 MobiDBLite consensus disorder prediction 404 420 - -
Pste1g02897 617 MobiDBLite consensus disorder prediction 495 511 - -
Pste1g02897 617 Pfam Scd6-like Sm domain 16 89 IPR025609 -
Pste1g02897 617 ProSiteProfiles FFD box profile. 532 547 IPR025761 -
Pste1g02897 617 ProSiteProfiles DFDF domain profile. 466 502 IPR025762 -
Pste1g02897 617 SMART FDF_2 472 574 IPR019050 -
Pste1g02897 617 MobiDBLite consensus disorder prediction 108 152 - -
Pste1g02897 617 ProSiteProfiles TFG box profile. 554 574 IPR025768 -
Pste1g02897 617 Gene3D - 6 92 - -
Pste1g02897 617 ProSiteProfiles Sm domain profile. 8 91 IPR047575 GO:0003723
Pste1g02897 617 SMART LSM14_2 10 110 IPR025609 -
Pste1g02897 617 MobiDBLite consensus disorder prediction 108 144 - -
Pste1g02897 617 Pfam FDF domain 473 571 IPR019050 -
Pste1g02897 617 SUPERFAMILY Sm-like ribonucleoproteins 15 92 IPR010920 -
Pste1g02897 617 FunFam Trailer hitch, isoform C 10 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02897 Pste-Chr1 12415484 12422602 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02897 1 12415484 12422602 Pste1g02897 1 12415484 12422602 ECH