Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02804 TCCTCTTGTGCTGGTAGTAATAGTGCCTTCTTGGAACCTGATCATGAGGAGGGTGTGGATGAAGCCTCCATTTCTCTTTCTCTTGGCCTTCCTGGCCAACAACACAACCCCAAAGCCACTTCTTCCTCAAACTCTAACCATCATTACCTACAAAACCCTACCTCTGATGACCAGAGAGGTGTAACTGTTGCACTTCACATTGGCCTTCCCAATCCCACTACCACTTCACCAAACAGTGCCACCCTAACTAGCAAACCTGATCTTCATTTGGGTTCTTCCCCTACTCAGGGTCAGTACTGGATCCCTTCTCCTGCTCAAATCCTCATTGGACCCACCCAGAAAGGACCTGAATCATTGAGAGGAGCAAAACCAGCTTCTTCAATGCTGAGGCTACCCTGCTATTGTTGTGCTGAGGGTTGCAAGAACAACATAGACCATCCAAGGTCAAGGCCACTAAAGGATTTCAGAACCCTTCAGACACACTACAAGAGAAAGCATGGAGCAAAGCCATTCGGGTGCAGAAAGTGTGGCAAGCCTTTTGCTGTGCGAGGAGATTGGAGAACACACGAGAAGAACTGTGGTAAGCTTTGGTTCTGCATCTGTGGCTCTGATTTCAAGCACAAGAGATCCCTCAAAGACCATGTTCGTGCCTTTGGTGATGGCCATGCTCCTCACACTGTGGAGAGTTGTGATCAGATGGGGGAAGATGACTTGTTAGGTTATGAAGATGATGAGGAACTAGAATTAGACGACGATGATGAAGATTATAACAGTAATGAAGTGATAGAGAAAGAGACA 798 0.4699 SSCAGSNSAFLEPDHEEGVDEASISLSLGLPGQQHNPKATSSSNSNHHYLQNPTSDDQRGVTVALHIGLPNPTTTSPNSATLTSKPDLHLGSSPTQGQYWIPSPAQILIGPTQKGPESLRGAKPASSMLRLPCYCCAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCDQMGEDDLLGYEDDEELELDDDDEDYNSNEVIEKET 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02804 266 MobiDBLite consensus disorder prediction 68 91 - -
Pste1g02804 266 MobiDBLite consensus disorder prediction 27 59 - -
Pste1g02804 266 MobiDBLite consensus disorder prediction 1 91 - -
Pste1g02804 266 Gene3D Classic Zinc Finger 130 216 - -
Pste1g02804 266 FunFam Zinc finger protein WIP2 140 222 - -
Pste1g02804 266 SUPERFAMILY beta-beta-alpha zinc fingers 154 191 IPR036236 -
Pste1g02804 266 PANTHER ZINC FINGER PROTEIN WIP2 38 113 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02804 Pste-Chr1 11751898 11753743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02804 20 227 C2H2 Transcription Factor Family AT1G13290 62.762 1.63e-93 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste1g02804 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02804 1 11751898 11753743 Pste1g02804 1 11751898 11753743 ECH