Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02749 GGAAACGACACCAACCGAAGCCAAACGAGGTTCTCTGATCTCGGGGACCTTCACCATTCCTCTGCCGTTTTTCATCAAGAAGATGCTGTTGATTTGAGCTCAAGTTCTATGTTTAGTGTGAAGTCCAGCAATGTTGTTGGTGGTAGTAACATGCAATATGGGACATTGAGCACGGTGGTTTTTCTTTTTCTTACTCTTTCCCTTTGTTATAAGATGGTAGAAGAGTTTCTTTTATGTGAGGGTTTTAATGTTGGGTCTGCGGAGATTGGATCCAGTGGGGGAGGGTGCATGGATACGGGTCAACAACTGATGTACCATAAAGGAGTGACTATGGCAGCCTTGCCTTTGGGGAATGGTCATGTTGAGAACTGGGCTGATTCTGGCATAGCAGATAATAGCCAACAGACTGATGATACTTCCACAGATATTGACACTGATGATAAAATTCAATGCAATAGAGTTAAGAATGGGTCGCGAATGGTTGTGCACTCCAAGGATAAGACAAAGGTCAAAGTGGAAGATCAAAAGACCCTTCGCAGGCTGGCTCAGAATCGGGAGGCTGCAAGGAAGAGTCGGTTAAGGAAAAAGGCGTATGTACAGCAGTTGGAGAACAGCCGAGTCAAGCTTGTTCAGTTAGAGCAAGAACTTCAACGAGCACGTCAGCAGGGTATATTTATTGCGAATCCAGGGGATCAAGGTCATTTGGCTGTTGGAAATGGTGCCTTGGCATTTGACATAGACTATGCTCACTGGGTTGACGAGCATCAAAGGCTACTCAATGATCTAAGAACAGCTGTAAATTCTCAAATGAGTGATAATGACTTGCATCTTCTTGTTGATGGTGTCATGGCTCATTATAACGAGTTATTTAGGTTAAAGAGCATAGGTGCAAAGGCTGACACACTTCACATACATAATGGGATGTGGAAGACACCAGTGGAAAGATGTTTTATGTGGCTTGGTGGATTCCGTTCATCGGAACTTCTCAAGATAATCAAGAACCACCTTGAGCCATTAACAGAACAACAACTATTGGGAATTTGTAATCTGCAACAATCTTCCCAGCAGGCTGAGGATGCTTTAAATCAAGGCATGGAAGCATTACAACAATCTCTTGTAGAAACACTTTCCTCCACCTCCCTAGGACCCACTGGTAGTGCAAATGTTGCTGATTACATGGGCCAAATGGCTATTGCAATGAGCAAGATTGCTGATCTAGAGAGTTTCCTTCGTCAGGCTGACCTACTGAAGCAACAAACTCTTCAACAGTTGCAACGAATTCTGACAACGCGCCAAACGGCACGTGCACTCCTTGTCCAAAGTGATTACGTTTCAAGACTAAGAGCACTTAGTTCATTGTGGTTGGCGCGCCCTAGA 1377 0.443 GNDTNRSQTRFSDLGDLHHSSAVFHQEDAVDLSSSSMFSVKSSNVVGGSNMQYGTLSTVVFLFLTLSLCYKMVEEFLLCEGFNVGSAEIGSSGGGCMDTGQQLMYHKGVTMAALPLGNGHVENWADSGIADNSQQTDDTSTDIDTDDKIQCNRVKNGSRMVVHSKDKTKVKVEDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRVKLVQLEQELQRARQQGIFIANPGDQGHLAVGNGALAFDIDYAHWVDEHQRLLNDLRTAVNSQMSDNDLHLLVDGVMAHYNELFRLKSIGAKADTLHIHNGMWKTPVERCFMWLGGFRSSELLKIIKNHLEPLTEQQLLGICNLQQSSQQAEDALNQGMEALQQSLVETLSSTSLGPTGSANVADYMGQMAIAMSKIADLESFLRQADLLKQQTLQQLQRILTTRQTARALLVQSDYVSRLRALSSLWLARPR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02749 459 Coils Coil 195 222 - -
Pste1g02749 459 Gene3D - 175 224 - -
Pste1g02749 459 ProSiteProfiles DOG1 domain profile. 241 457 IPR025422 GO:0006351|GO:0043565
Pste1g02749 459 Pfam Seed dormancy control 259 333 IPR025422 GO:0006351|GO:0043565
Pste1g02749 459 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 179 194 IPR004827 GO:0003700|GO:0006355
Pste1g02749 459 SUPERFAMILY Leucine zipper domain 176 219 IPR046347 GO:0003700|GO:0006355
Pste1g02749 459 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 174 218 IPR004827 GO:0003700|GO:0006355
Pste1g02749 459 PANTHER TRANSCRIPTION FACTOR TGA9 121 459 - -
Pste1g02749 459 FunFam BZIP family transcription factor 175 224 - -
Pste1g02749 459 Pfam bZIP transcription factor 176 215 IPR004827 GO:0003700|GO:0006355
Pste1g02749 459 CDD bZIP_HBP1b-like 176 227 - -
Pste1g02749 459 SMART brlzneu 172 241 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02749 Pste-Chr1 11298882 11302785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02749 12 459 bZIP Transcription Factor Family AT1G68640 56.637 3.11e-159 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste1g02749 DOG1 9.1e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02749 1 11298882 11302785 Pste1g02749 1 11298882 11302785 ECH