Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02671 GAGAATGAGTGTTGTAGCATAGAAAGGGATATGATGAAGCAAAGTTGTAATGGGTGTCGTATTCTCAGGAAGGGTTGTTGTGAAGAGTGTATTATTAAGCCATGTCTTGAGTGGATAAACTCTCCTAATGCCCAAGCCAATGCTACTCTCTTCCTTGCCAAATTCTATGGCCGTGTTGGCTTGCTCAACCTCATCAATGCTGCCCTCCACACCTTCGCCCTGGTCTTTCATTTTCCTTCCCATTTCATTTCAATTATCTCTATATTTTTCTATTACCATACATTTGGTCTCCAAAGATTAATATATGTTCAAAAATCTTATTCATCACTTTACTTTGATCTCCCTTTTCTTCTTGTGTTCAAGTCTTTAATGTATGAGGCATGTGGAAGAATTGCGAACCCAACATTTGGATCAGTGGGCCTCTTTTGGACCGGTGAGTGGGCCCATTGCCAAGCTGCCGTTGAAGCTGTGTTAGCTGGGTCCCAAATTAATGCTGTGGTTGCTTCCCATTCACAGAAGACACCTGGCACCCACCATGTTTCCCAGAACATTGGCATACGCCACGTGTCCAAGCATGCTGACGTGGACGACCAGAAAGGAAAAGCCAAGAAGATCAAGAGGACTAGGAAGGTGATCCAGATGAAGCCGCAAATGGGTTCGGCTGCACTGTGGAAGCCGACTTCAAGCTGTGCGCCGAGCCATGAGGAAACTGTGGAGGCTATGTTGGCGAATCCAAATGGTGGAGCTGAGATTAATTTGGAGCTCACTCTCACCTAG 777 0.4556 ENECCSIERDMMKQSCNGCRILRKGCCEECIIKPCLEWINSPNAQANATLFLAKFYGRVGLLNLINAALHTFALVFHFPSHFISIISIFFYYHTFGLQRLIYVQKSYSSLYFDLPFLLVFKSLMYEACGRIANPTFGSVGLFWTGEWAHCQAAVEAVLAGSQINAVVASHSQKTPGTHHVSQNIGIRHVSKHADVDDQKGKAKKIKRTRKVIQMKPQMGSAALWKPTSSCAPSHEETVEAMLANPNGGAEINLELTLT 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02671 258 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 15 214 - -
Pste1g02671 258 ProSiteProfiles LOB domain profile. 14 163 IPR004883 -
Pste1g02671 258 Pfam Lateral organ boundaries (LOB) domain 119 158 IPR004883 -
Pste1g02671 258 Pfam Lateral organ boundaries (LOB) domain 15 68 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02671 Pste-Chr1 10476886 10478912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02671 12 210 AS2 family AT3G02550 41.951 7.88e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste1g02671 LOB 3.7e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02671 1 10476886 10478912 Pste1g02671 1 10476886 10478912 ECH