Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02532 AGAGTGACCCACTTTACCGTGAATGACGAAGTAGGAGAATAAAAAGTCCGTCTGCAATCGTGCAGCCTTGTAGGGTCGAGAGAGGATTGAGAGGCTAGAAAGCGACTGAACAACCTAGAAGCACGAGAATCACGCATTCAATTACGAGCCAAGACTGATGTTAATTTTCCTTTCATTCTTTTGTTTAGAACGAGAATAATTCGGACCCGCCATATAAAAATCTGGTGTACTAAAACTAAGATGTCTTATCTGCCCCCTTGTGATTTGCTTTTCGCACGTTAAATCACTGCCTCTAGTTAATACTTAAACATCATCAAAGTCTAGTCTATCTGTTGTTTACTTGGTTGTTTGGAACAGGAGATTGTGTTTCAATGGACAGCAACGATATCTTAGGTCTTCTCAAACTTCGAATTAAAAAAGGTATTAATCTTGCAATTCGTGATGCTCGTTCCAGCGATCCTTATGTGGTGGTCACCATGGGCGATCAGAAGCTGAAGACTCGTGTTATAAAAAAAAACTGCAATCCTGTGTGGAATGAAGAATTGACGTTCTCTGTAAGGGACGTTAAAACCCCAATACATCTGATGGTTTTTGACAAAGACACTTTCTCTGTGGATGACAAAATGGGTGAGGCAGAGATAGACTTTAAACCATATGTTCAGTGTATGCAGATGGGATTGAAAAAGCTCCCAAATGGTTGTGCAGTCAAGAGGATTAAAGCAGACAGAACTAATTGCCTTGCTGAAGAGAGCAGCTGTATTTGGCAAAATGGAAATATTGTTCAAGAAATGATTTTGAGATTGAAAAATGTTGAGAGGGGGGAGTTAATTGTGGAAATTGAGTGGGTTGATATTGTTGGTTGCAGGGGCTTATCACATGTAAAACTTTAAGTGAGCTACTATCCTTAAGGTTGTATAAAATTGAATGAGGCATTGAAGCTTGGATGCTAGTTCCTGGTTAATGCAGTGGTAAATAAATGTATTGTGATGTAACCTTTGATACTAGTGCTGAATTTGTCATCGTAAGTTCTAACTTTTGTACTTTATCCTCTGGGGTGAGATATAAGTAATTATCAACTTCTTGAAACATTTTAGTCGTGAAGATTTTTTGTTTAATTCCCTATTGTTGATCAATAATTTT 1140 0.3807 MDSNDILGLLKLRIKKGINLAIRDARSSDPYVVVTMGDQKLKTRVIKKNCNPVWNEELTFSVRDVKTPIHLMVFDKDTFSVDDKMGEAEIDFKPYVQCMQMGLKKLPNGCAVKRIKADRTNCLAEESSCIWQNGNIVQEMILRLKNVERGELIVEIEWVDIVGCRGLSHVKL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02532 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 6 163 IPR044562 -
Pste1g02532 172 SMART C2_3c 9 104 IPR000008 -
Pste1g02532 172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 159 IPR035892 -
Pste1g02532 172 CDD C2_ArfGAP 7 150 - -
Pste1g02532 172 Gene3D C2 domain 4 163 IPR035892 -
Pste1g02532 172 Pfam C2 domain 9 94 IPR000008 -
Pste1g02532 172 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02532 Pste-Chr1 9424485 9432935 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02532 40 169 C2H2 Transcription Factor Family AT1G70790 66.667 1.02e-60 183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02532 1 9424485 9432935 Pste1g02532 1 9424485 9432935 ECH
Pste1g02532 1 9424485 9432935 Pste9g01436 9 13773524 13776208 ECH
Pste1g02532 1 9424485 9432935 Pste7g02020 7 18547041 18549455 ECH