Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01972 CGCAAAGTCCCTTTCTGCCATAGCTTCCGAGTTCCGATTGCGTGTGCCTCACTACCTCCAATTCCGGCGAAGCCCTTTCTACCACAGCCCTTTCTCTCACTCTCGATGAGTCAGTCTCTCACTCTCAGCTTTTTGGATGATTCTGAATATGAGAACCACATGCCTTCGGTTCATCGAGCAAACTTCTCCAATCGCCACACCCAATTCTCCCAACGGAGGTACAAGATTATACAACAGAGGAAGTCTCTTCCGATTGCCCAAGTTGAGAAAAGGCTGGTTGAAGAGGTTTGGAAGAATGATGTGTTGATTATTGTTGGTGAAACTGGAAGTGGAAAGACCACTCAGATTCCACAGTTTCTGTTTGATGCTGGATTTTGCTGTGATGGAAGGGCTGTTGGGATAACGCAACCTAGACGAGTAGCTGCTGTCACTGTGGCCAAACGAGTTGCTGAGGAATGTGGTGTTGAGTTGGGCCAGAAGGTTGGGTATTCAGTTAGATTTGATGATTCTACTTCTGCATCGACAAGGATCAAATATATGACAGATGGGTTGCTTTTGAGGGAAGCATTGTTGGACTCATATCTTTCTAAGTATTCTGTTATAATAGTTGATGAAGCACATGAGAGGACTGTTCACACTGATGTCTTGATGGGCTTGCTAAAAAATGTACAACTTGCTAGGTCAAGTTCTGTTGGTGATGGTCATGGCCTTAATTTTGGAAAAAAGAACATGAATAATGTCATGTTGGAGAAAGAAAATGGTCAGAGTGGCAGTTTCCTTAAAAAGCCTCGCCATGAGAAGTATGTTCCATTGAAGTTAATCATCATGTCTGCAAGTCTTGATGCGCGCACTTTCTCTGAGTACTTTGGTGGTGCCAAAGCTGTTCACATCCAAGGGAGACAGTTTCCTGTAGATATATTTTATACTCTCCTTCCCGAGACAGATTATTTAGATGCTTCCTTAATAACAATATTCCAGATTCATTTAGAGGAAGACCCTGGTGATATACTAGTTTTTCTGACTGGGCAAGAAGAGATTGAATCTGTTGAAAGGCTTATCAATGAGAAACTCCCACATTTACCTGAAAAAAGTCAGAAGCTTCTAGTTGTGCCAATATTTGCTGCTCTTCCATCTGAGCAGCAAATGCAGGTCTTTGCACCAGCTCCATCTGGGGTTCGGAAGGTGATATTGGCAACTAATATTGCTGAGACATCAATAACAATTCCTGGAATCAAGTATGTAATTGATCCTGGGTTTGTTAAAGCACGTTCCTATGACCCTGGAAAAGGCATGGAATCCTTGATTATAATACCTACATCCAAATCCCAAGCTCTGCAAAGAAGTGGGCGTGCAGGGCGTGAAGGCCCTGGAAAATGCTTCCGTCTATATCCTGAGAAAGAATTTGAGAAACTCGAGGATTCAACAATGCCAGAGATTAAGCGATGCAACCTTTCTAATGTCATTTTGCAGCTGAAGGCTTTGGGTGTGGATGACATACTAGGGTTTGATTTCATTGAGAAACCTTCAAGGACAGCTATTTTGAAATCTTTGGAGCAGCTATTTTTGTTAGGTGCTCTAACAGATGAATGCAAACTATCAGATCCTGTTGGGCATCAAATGGCTCGACTGCCCTTGGATCCTGTTTATTCCAAAGCTCTTATTTTAGCTAGTCAGTTTAACTGCTTGGAGGAGATGTTGATAACTGTGGCACTGCTGTCTGTGGAGTCCATATTTTATAGTCCTCGTGACAAGCAAGAAGAGGCAAGAACTGCAACAAAATGCTTCTCAAGTCCTGAGGGAGACCACATCACTTTGATTAATGTTTATCGAGCATCTAATGATTTCTTGGAGAAGAGATCAATGGAAATGAGTATGGCAAAGACTGAAAAGGTTTATAGAAAATGGTGTAAAGAAAATTTTATTAATAACCGATCTCTTAGACATGCCCGTGACATTCACAGGCAGATTCAGGGACATGTTAAACAAATGGGTCTGAATCTTTCTTCTTGTGGGGATGATATGCTTCAATTCCGCAGATGCCTGGCTGCATCCTTTTTTCTCAATGCAGCTGTGAAGCAGCCAGAGGGCACATACAGGGCTTTGGCAAGTGGTCAGGTGGTGCAGATCCACCCTTCTTCTGTATTATTCCGGCAAAAACCAGAGTGTGTGATATTTAATGAATTGGTCCAAACTAATAATAAGTATGTTATTTATCTGTTGGAACAGATAAGTGCAAGCTTCAAATTATGTCCTGCCACTGGGGCTTGTCTATGGCATTTGGAAACCATTGGATGCTGGGATGTAGAGGTGCCACTGAATCCTTTAATGACAAGCACTTCTTGCTGGGTTTGTGTTACATTATTTTCTCTTGGTAAGCTATGGTCCACTGAGATTGAGGAACAACTACGTGGTGGTAGGGTGCACCTTACAGTTTGTGATCTCATGGGT 2448 0.4244 RKVPFCHSFRVPIACASLPPIPAKPFLPQPFLSLSMSQSLTLSFLDDSEYENHMPSVHRANFSNRHTQFSQRRYKIIQQRKSLPIAQVEKRLVEEVWKNDVLIIVGETGSGKTTQIPQFLFDAGFCCDGRAVGITQPRRVAAVTVAKRVAEECGVELGQKVGYSVRFDDSTSASTRIKYMTDGLLLREALLDSYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSSSVGDGHGLNFGKKNMNNVMLEKENGQSGSFLKKPRHEKYVPLKLIIMSASLDARTFSEYFGGAKAVHIQGRQFPVDIFYTLLPETDYLDASLITIFQIHLEEDPGDILVFLTGQEEIESVERLINEKLPHLPEKSQKLLVVPIFAALPSEQQMQVFAPAPSGVRKVILATNIAETSITIPGIKYVIDPGFVKARSYDPGKGMESLIIIPTSKSQALQRSGRAGREGPGKCFRLYPEKEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRTAILKSLEQLFLLGALTDECKLSDPVGHQMARLPLDPVYSKALILASQFNCLEEMLITVALLSVESIFYSPRDKQEEARTATKCFSSPEGDHITLINVYRASNDFLEKRSMEMSMAKTEKVYRKWCKENFINNRSLRHARDIHRQIQGHVKQMGLNLSSCGDDMLQFRRCLAASFFLNAAVKQPEGTYRALASGQVVQIHPSSVLFRQKPECVIFNELVQTNNKYVIYLLEQISASFKLCPATGACLWHLETIGCWDVEVPLNPLMTSTSCWVCVTLFSLGKLWSTEIEEQLRGGRVHLTVCDLMG 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01972 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 644 IPR027417 -
Pste1g01972 816 Pfam Helicase associated domain (HA2) 516 640 IPR007502 GO:0004386
Pste1g01972 816 CDD DEXHc_DHX33 83 297 - -
Pste1g01972 816 Gene3D - 301 474 IPR027417 -
Pste1g01972 816 Gene3D - 42 300 IPR027417 -
Pste1g01972 816 SMART ha2_5 515 606 IPR007502 GO:0004386
Pste1g01972 816 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 321 495 IPR001650 -
Pste1g01972 816 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 301 475 - -
Pste1g01972 816 CDD SF2_C_RHA 302 463 - -
Pste1g01972 816 Gene3D - 502 598 - -
Pste1g01972 816 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 678 739 IPR011709 -
Pste1g01972 816 FunFam ATP-dependent RNA helicase DHX8 502 599 - -
Pste1g01972 816 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 93 298 IPR014001 -
Pste1g01972 816 SMART ultradead3 81 307 IPR014001 -
Pste1g01972 816 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 199 208 IPR002464 -
Pste1g01972 816 Pfam Helicase conserved C-terminal domain 325 454 IPR001650 -
Pste1g01972 816 SMART helicmild6 347 455 IPR001650 -
Pste1g01972 816 PANTHER ATP-DEPENDENT RNA HELICASE 70 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01972 Pste-Chr1 6156398 6165792 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01972 1 6156398 6165792 Pste1g01972 1 6156398 6165792 ECH