Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01696 ATGTCCTGGATGCAAGGCCAAGAAGAGGTAACAGTAAAGGTATCAAAGTGTGAAGACTGTGGGAACCAAGCCAAGAAGGATTGTGCACACTCAAGGTGCAGAACCTGCTGTAAGAACAAAGGGTTTAAATGCCAGACCCATATCAGAAGCACTTGGATTCCTGTCGATAGAAGGCGTCAGAAAGTGGAGCAGTCACCTTCCACTGCTAATCTTCAGGGAGATATTCCTAAAAGGCACAAGCACAACCCATATTCAAAGGAGTTCAAATTTCCATCCGCTATGAGTTCGATGGCGTTATGCAGCTGCGTTCAGGTGCGTTCTATGGATGACACGGTTAATGAAATAGCATATCAAACATCTGTAAACATTGGAGGACATGTATTTAGTGGTCTTCTTTATGATCAAGGACCTGAACAAAGCTTCAGTGCTAAGGGTGACAGCAGCTTCATAGACCCTTTTGATCCACAACACAGTCTCAATCTTAGGAGTGTTTCAATCAACACTCATGATGGTGCAAGTGCAACTATGCCTCCACCATCAGCCGCTGCTACTCAGGAACCACTTTTTCCTCCACCACATCCATTTCCCTTAGCCTCCTTCAGACCAGATATGACATACTTGTCACACCCAAAACCTTAA 639 0.4476 MSWMQGQEEVTVKVSKCEDCGNQAKKDCAHSRCRTCCKNKGFKCQTHIRSTWIPVDRRRQKVEQSPSTANLQGDIPKRHKHNPYSKEFKFPSAMSSMALCSCVQVRSMDDTVNEIAYQTSVNIGGHVFSGLLYDQGPEQSFSAKGDSSFIDPFDPQHSLNLRSVSINTHDGASATMPPPSAAATQEPLFPPPHPFPLASFRPDMTYLSHPKP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01696 212 MobiDBLite consensus disorder prediction 168 193 - -
Pste1g01696 212 Pfam Domain of unknown function (DUF702) 15 138 - -
Pste1g01696 212 MobiDBLite consensus disorder prediction 58 80 - -
Pste1g01696 212 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 10 179 IPR007818 GO:0003700|GO:0006355
Pste1g01696 212 NCBIfam LRP1 C-terminal domain 89 137 IPR006511 -
Pste1g01696 212 NCBIfam putative zinc finger domain, LRP1 type 16 58 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01696 Pste-Chr1 5219212 5220170 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pste1g01696 DUF702 1.6e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01696 1 5219212 5220170 Pste1g01696 1 5219212 5220170 ECH
Pste1g01696 1 5219212 5220170 Pste1g02917 1 12552095 12553952 ECH
Pste2g00764 2 8038296 8039960 Pste1g01696 1 5219212 5220170 ECH