Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01550 TCTCTCTCTCTCTCTCTCTTCAGTCTTCGACTTTGAGCTTTTTCGCTACCATGAACGCACCCATCATAGACCCGTTACAGGGAGATTTCCCGGAAGTGATAGAGGAGTATTTGGAACATGGGTGTATGAAATGTATTGCCTTCAATCGTCGTGGTACTCTTCTTGCTGCTGGGTGCAATGACGGAAGTTGCATTATCTGGGATTTTGAAACCCGGGGCATTGCTAAAGAGCTACGAGATAACGAATGTATGTCTCCAATAACCTGTGTCAGTTGGTCAAAGTGTGGTCATCGAATTCTTGTATCAGCTGCTGACAAGTCATTGTCACTGTGGGATGTCATGAGTGGTAAGAGGATAACAAGAATAGTTTTACAACAAACACCTTTACAAGCTCGTCTTCATCCGGGTTCCTCTAAACCATCTCTTTGCTTGGCATGCCCTCTCTCATGTGCTCCAATGATTGTTGACTTGAACACAGGAAACACAACTTTGCTTAAAGTTTCTATCTCAGAGATATCCAATAATGGACCAACCTCTGCCTCACGTAACAAGTGCGCCGATGGAATTACCTCCTTCTCGCCAACTGCTGCATGTTTTAGTAAGTATGGCAACCTGGTTTATGTTGGAAACTCTAAAGGGGAAATTCTTGTAATTAACTATATAAATATTGAGGTGCGTGCCGTGGTTCCTATCCCTGGGGGTTCTGTAGTGAAGAACATTGTGTTTAGCAGGAATGGGCAGTATATTTTAACAAACTCAAATGATCGAATAATCAGGATCTATGAAAATCTTCTACCACTAAAAGATGAAGTTAGAGCACTTGATGAGCTGAATGAGAACCTCAATGATCTACATGACGTTGAGAAGTTGAAAGCTGTAGGATCAAAATGCCTAACTTTGTTCCGGGAGTTTCAAGATTCAATAACAAAGGTGCACTGGAAAGCACCCTGCTTCAGTGGGGATGGTGAGTGGGTTGTGGGTGGTTCTGCTAGTAAAGGAGAGCACAAGATTTACATATGGGATAGAGTTGGGCATCTTGTGAAGATCCTTGAAGGACCTAAGGAAGCCATTATTGATTTAGCATGGCATCCTGTACGTCCAATTGTGGTATCTGTTTCTTTGAACGGCATAGTTTATATCTGGGCTAAAGATTACACCGAAAACTGGAGTGCATTTGCTCCTGATTTCAAAGAGCTCGAGGAAAATGAGGAGTATGTGGAGCGAGAAGATGAATTTGATTTGATTCCCGAGACTGAGAAGGTAAAGGGATCTGATGTTAACGAAGATGATGAAGTTGACATTGTAACGGTGGAGAAAGATCCTGCTTTCAGTGACTCTGATATGTCTGAAGAAGAGTTATGTTTCCTGCCAGCAACTCCCACTTGTGATGCTCCTGAACAACCAGACAAGTTTGTGGAAAGTTCTTCAAAGTTGATGGACAGCAACAACTCTGGATCCCCACTTTCAGAAGAAGCTGGACCAATTGAACATACTGTGAACCATAACTCAAGTCCAGTTGAAGATGATGCTGGGGGAATACGGATTAAAAGAAAACGGAGACCTTCAGAGAAAGTGTTGGAGTTGCAGGCAGAGAAAATGAAGAAACCCTCAAAATCTAGCAAATAATCAAAATCCAAAAGTAAATATTTTGTTGATGAGGACGATGGTAATAGTTTTCATGGTGATGTACTTTCTGATGAATAGTAGTGGACTCTTGCTAATTCTTGTTTATAAATTCGTGTTTTGTTATAATTGTTTTTTGTCTTTCATTTTTTATATTTCTT 1783 0.4111 MNAPIIDPLQGDFPEVIEEYLEHGCMKCIAFNRRGTLLAAGCNDGSCIIWDFETRGIAKELRDNECMSPITCVSWSKCGHRILVSAADKSLSLWDVMSGKRITRIVLQQTPLQARLHPGSSKPSLCLACPLSCAPMIVDLNTGNTTLLKVSISEISNNGPTSASRNKCADGITSFSPTAACFSKYGNLVYVGNSKGEILVINYINIEVRAVVPIPGGSVVKNIVFSRNGQYILTNSNDRIIRIYENLLPLKDEVRALDELNENLNDLHDVEKLKAVGSKCLTLFREFQDSITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRVGHLVKILEGPKEAIIDLAWHPVRPIVVSVSLNGIVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPETEKVKGSDVNEDDEVDIVTVEKDPAFSDSDMSEEELCFLPATPTCDAPEQPDKFVESSSKLMDSNNSGSPLSEEAGPIEHTVNHNSSPVEDDAGGIRIKRKRRPSEKVLELQAEKMKKPSKSSK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01550 524 Coils Coil 250 270 - -
Pste1g01550 524 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 5 510 IPR037850 GO:0048188
Pste1g01550 524 SMART WD40_4 162 202 IPR001680 GO:0005515
Pste1g01550 524 SMART WD40_4 205 245 IPR001680 GO:0005515
Pste1g01550 524 SMART WD40_4 277 324 IPR001680 GO:0005515
Pste1g01550 524 SMART WD40_4 326 365 IPR001680 GO:0005515
Pste1g01550 524 SMART WD40_4 54 95 IPR001680 GO:0005515
Pste1g01550 524 SMART WD40_4 13 51 IPR001680 GO:0005515
Pste1g01550 524 FunFam Compass component swd1 164 424 - -
Pste1g01550 524 MobiDBLite consensus disorder prediction 442 524 - -
Pste1g01550 524 MobiDBLite consensus disorder prediction 457 472 - -
Pste1g01550 524 ProSiteProfiles Trp-Asp (WD) repeats profile. 26 60 IPR001680 GO:0005515
Pste1g01550 524 ProSiteProfiles Trp-Asp (WD) repeats profile. 70 104 IPR001680 GO:0005515
Pste1g01550 524 Gene3D - 266 388 IPR015943 GO:0005515
Pste1g01550 524 Gene3D - 21 265 IPR015943 GO:0005515
Pste1g01550 524 ProSiteProfiles Trp-Asp (WD) repeats profile. 333 364 IPR001680 GO:0005515
Pste1g01550 524 SUPERFAMILY WD40 repeat-like 23 364 IPR036322 GO:0005515
Pste1g01550 524 Pfam WD domain, G-beta repeat 22 51 IPR001680 GO:0005515
Pste1g01550 524 Pfam WD domain, G-beta repeat 280 324 IPR001680 GO:0005515
Pste1g01550 524 Pfam WD domain, G-beta repeat 68 95 IPR001680 GO:0005515
Pste1g01550 524 MobiDBLite consensus disorder prediction 493 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01550 Pste-Chr1 4829284 4835667 Dispersed